Protein Alignment Awh and lhx4

DIOPT Version :9

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_001116445.1
• Gene: lhx4 / 571943
• ZFINID: ZDB-GENE-060728-1
• Length: 391
• Species: Danio rerio
• Alignment Length: 317
• Identity: 108/317 - (34%)
• Similarity: 153/317 - (48%)
• Gaps: 59/317 - (18%)

  Fly     4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAK 68
            ::..||.|.:.|.|:|.|:|....||:.||:|..|...|  ...||.|...||||.|:.|.||.|
Zfish    29 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALL--ADKCFSRAGNVYCKEDFFKRFGTK 91

  Fly    69 CSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDD-RVLCKAHYLETVEGGTT 132
            |:.|.:||..:..||:|::.|:||.||||..|.|||:||::|.||:| |::||..| ||.:
Zfish    92 CASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCKEDY-ETAK---- 151

  Fly   133 SSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQ 197
            .:|:...|       .||.|||.|.:||:.|::.::....|.....|:::|.|||..||.|||||
Zfish   152 QNDDSETG-------AKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 209

  Fly   198 NSRARQKK-HIHAGKNK-------IREPEGSSFAR---------------------------HIN 227
            |.||::|: ...||:::       ::...|||...                           |.|
Zfish   210 NRRAKEKRLKKDAGRHRWGQFYKSVKRNRGSSKTEKESSADDAGLSDSELSFRDDQILSDLGHAN 274

  Fly   228 LQLTYSFQNNAQNPMHLNGS---KAGLYPTHE---SSMDELSQD-SSVHCMPSEVXL 277
              ..|....:..|...||||   ..|..|.|:   .|...|.|. ||:..:|... |
Zfish   275 --GLYGSVGDVSNGNMLNGSFSLDGGGQPYHDLRAGSPYGLPQSPSSITSLPGHTPL 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	22/52 (42%)
		LIM2_AWH	69..123	CDD:188765	27/54 (50%)
		Homeobox	152..204	CDD:278475	23/51 (45%)
lhx4	NP_001116445.1	LIM1_Lhx4	33..84	CDD:188852	22/52 (42%)
		LIM2_Lhx3_Lhx4	92..147	CDD:188762	27/54 (50%)
		Homeobox	163..216	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910