Protein Alignment Awh and lmx1ba

DIOPT Version :9

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_001349521.1
• Gene: lmx1ba / 554361
• ZFINID: ZDB-GENE-050114-3
• Length: 375
• Species: Danio rerio
• Alignment Length: 315
• Identity: 108/315 - (34%)
• Similarity: 149/315 - (47%)
• Gaps: 46/315 - (14%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKC 72
            |..|..||||||.|.:...|||..||:|.:|...|  ..||:.|:.::|||.||.:.|..|||.|
Zfish    33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLL--TMSCYSRDHKLYCKHDYQQLFATKCSGC 95

  Fly    73 CRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHY-------LETVEGG 130
            ...||.::.|.||.|.|:||:||.|..|.|:|..|::|.|.:.::|||..|       ...:...
Zfish    96 LEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDYEREKDLASPDLSDS 160

  Fly   131 TTSSDEGCD----------GDGYHKSK----TKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
            ..|.||..|          |.|...||    .||.||..|.:|.:..:|:|::.|.|..:..|.:
Zfish   161 DKSEDEDLDVKPEKGAGGQGKGSDDSKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETL 225

  Fly   182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNKIREPEGSS-------FARHINLQLTYSFQNNAQ 239
            |:.||||.||.||||||.||:.|| :...:.:.:|.:.|.       .:|..||..:|:  ..|.
Zfish   226 AAETGLSVRVVQVWFQNQRAKMKK-LARRQQQQQEQQNSQRLGQDVMSSRMENLMSSYT--PLAP 287

  Fly   240 NPMHLNGS-----------KAGLYPTH--ESSMDELSQDSSVHCMPSEVXLEQSS 281
            .|.|...|           :.||.|..  ...|:....||..|.:.|:. |...|
Zfish   288 PPPHALVSMESSGYSTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLS 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	23/52 (44%)
		LIM2_AWH	69..123	CDD:188765	24/53 (45%)
		Homeobox	152..204	CDD:278475	24/51 (47%)
lmx1ba	NP_001349521.1	LIM1_Lmx1b	33..85	CDD:188757	24/53 (45%)
		LIM	92..146	CDD:295319	24/53 (45%)
		Homeobox	195..248	CDD:306543	24/52 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910