Protein Alignment Awh and Scr

DIOPT Version :10

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 147
• Identity: 34/147 - (23%)
• Similarity: 61/147 - (41%)
• Gaps: 21/147 - (14%)

  Fly   123 YLETVEGGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGL 187
            :::.|..||::.:.        ..:|||.||::|..|...|:..|..:.....:....||....|
  Fly   307 WMKRVHLGTSTVNA--------NGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363

  Fly   188 SKRVTQVWFQNSRARQKK-HIHAGKNKI---REPEGSSFARHINLQLTYSFQNNAQNPMHLNGSK 248
            ::|..::||||.|.:.|| |..|..|.:   ..|.|..:         :.|..:.....||:...
  Fly   364 TERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGHPY---------HQFDIHPSQFAHLSAXD 419

  Fly   249 AGLYPTHESSMDELSQD 265
            |..:......:::|.|:
  Fly   420 AWHFSGTGXRLNQLYQE 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759
		LIM2_AWH	69..123	CDD:188765	34/147 (23%)
		Homeodomain	149..205	CDD:459649	17/55 (31%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	17/55 (31%)