DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Awh and pdlim5b

DIOPT Version :9

Sequence 1:	NP_001261379.1	Gene:	Awh / 38451	FlyBaseID:	FBgn0013751	Length:	287	Species:	Drosophila melanogaster
Sequence 2:	NP_956490.1	Gene:	pdlim5b / 393165	ZFINID:	ZDB-GENE-040426-908	Length:	628	Species:	Danio rerio

Alignment Length:	148	Identity:	40/148 - (27%)
Similarity:	55/148 - (37%)	Gaps:	34/148 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 SCAACGEPISDRFFLEVGG------------------C--------------SWHAHCLRCCMCM 39
            :|:.|...::|..|:|..|                  |              :||.:|..|..|.
Zfish   477 TCSHCRSSLADVGFVEERGSVYCVLCYEEFLAPTCFQCHKKIIGEVINALKQTWHVNCFLCASCK 541

  Fly    40 CPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQL 104
            .|:. ..:..:.:||.||:.||...||..|..|...|.|.|....|....:|..||.|..|...|
Zfish   542 QPIG-NNTFHLEDRQPYCEKDYYSLFGTGCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSL 605

  Fly   105 STGEQFALMDDRVLCKAH 122
            . |:.|....|:.|||.|
Zfish   606 E-GQTFFSKKDKPLCKKH 622

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	17/84 (20%)
		LIM2_AWH	69..123	CDD:188765	19/54 (35%)
		Homeobox	152..204	CDD:278475
pdlim5b	NP_956490.1	PDZ_signaling	11..80	CDD:238492
		DUF4749	243..335	CDD:292558
		LIM1_Enigma_like	452..503	CDD:188747	6/25 (24%)
		LIM2_Enigma_like	511..562	CDD:188748	11/51 (22%)
		LIM	570..624	CDD:295319	19/54 (35%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000