Sequence 1: | NP_001261379.1 | Gene: | Awh / 38451 | FlyBaseID: | FBgn0013751 | Length: | 287 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006234134.1 | Gene: | Lhx2 / 296706 | RGDID: | 71076 | Length: | 414 | Species: | Rattus norvegicus |
Alignment Length: | 369 | Identity: | 105/369 - (28%) |
---|---|---|---|
Similarity: | 162/369 - (43%) | Gaps: | 106/369 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY--------SKN 64
Fly 65 FGA-KCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETVE 128
Fly 129 G------------------------------------------GTT---------SSDEGCD--- 139
Fly 140 ---------GDGYH---------KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 186
Fly 187 LSKRVTQVWFQNSRARQKKHI----HAGKNKIRE-------PEGSSFARHINLQLTYSFQNNAQN 240
Fly 241 PMHLNGSKAGLYPTHESSMDELSQDSSVHCMPSEVXLEQSSPAR 284 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Awh | NP_001261379.1 | LIM1_AWH | 8..61 | CDD:188759 | 22/52 (42%) |
LIM2_AWH | 69..123 | CDD:188765 | 26/53 (49%) | ||
Homeobox | 152..204 | CDD:278475 | 27/51 (53%) | ||
Lhx2 | XP_006234134.1 | LIM1_Lhx2 | 43..106 | CDD:188853 | 22/52 (42%) |
LIM2_Lhx2_Lhx9 | 119..177 | CDD:188763 | 26/57 (46%) | ||
COG5576 | <255..386 | CDD:227863 | 41/136 (30%) | ||
Homeobox | 278..331 | CDD:395001 | 27/52 (52%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |