Protein Alignment Awh and lim-4

DIOPT Version :9

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_508669.1
• Gene: lim-4 / 180672
• WormBaseID: WBGene00002987
• Length: 355
• Species: Caenorhabditis elegans
• Alignment Length: 278
• Identity: 127/278 - (45%)
• Similarity: 162/278 - (58%)
• Gaps: 45/278 - (16%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY----------- 61
            |..|...|.|:|||.:.|.::|.:||:|..|..||..:  ||.:::..|||..|
 Worm    98 CTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNK--CFYKDKTFYCKGCYFRTHVTSTASS 160

  Fly    62 SKNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLET 126
            .:..|.||:.|.|.|.|:|||||||..|:|||||:|:||.|||||||::||.:..:|||.|:||.
 Worm   161 CRELGPKCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEEYALQEGNLLCKQHFLEL 225

  Fly   127 VEGGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRV 191
            |||.:..|.:        |:|||||||||.|:||.|||..|..||||||.|||:|||:|||||||
 Worm   226 VEGDSGVSSQ--------KAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRV 282

  Fly   192 TQVWFQNSRARQKK-HIHAGKNKIREPEGSSFARHINLQLTYSFQNNAQNP----MHLNGSKAGL 251
            |||||||||||||| |     .|.....|.|             |.::..|    ...:.|...:
 Worm   283 TQVWFQNSRARQKKWH-----QKSEGDNGDS-------------QRSSVGPSSPSQKSDSSSEMM 329

  Fly   252 YPTH-ESSMDELSQDSSV 268
            |||. .:|:::...||.|
 Worm   330 YPTSVTTSVEDAIPDSIV 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	20/52 (38%)
		LIM2_AWH	69..123	CDD:188765	33/53 (62%)
		Homeobox	152..204	CDD:278475	41/51 (80%)
lim-4	NP_508669.1	LIM	98..153	CDD:278823	21/56 (38%)
		LIM2_AWH	168..222	CDD:188765	33/53 (62%)
		HOX	239..295	CDD:197696	45/55 (82%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160157426
Domainoid	1	1.000	96	1.000	Domainoid score	I4644
eggNOG	1	0.900	-	-		E33208_3BHYC
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	226	1.000	Inparanoid score	I2230
Isobase	1	0.950	-	0	Normalized mean entropy	S3139
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001821
OrthoInspector	1	1.000	-	-		oto17805
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR24208
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	1	1.000	-	-		X1183
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.830