Protein Alignment Awh and Lhx3

DIOPT Version :9

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_001034742.1
• Gene: Lhx3 / 16871
• MGIID: 102673
• Length: 402
• Species: Mus musculus
• Alignment Length: 292
• Identity: 103/292 - (35%)
• Similarity: 152/292 - (52%)
• Gaps: 42/292 - (14%)

  Fly     1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNF 65
            ::.|:..||.|.:.|.|||.|:.....||:.||:|..|..||  .:.||.|...||||.|:.|.|
Mouse    29 LRREIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPL--AERCFSRGESVYCKDDFFKRF 91

  Fly    66 GAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDD-RVLCKAHYLETVEG 129
            |.||:.|..||..:..||||::.|:||.||||..|.|||:||::|.||:| |::|||.|
Mouse    92 GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY------ 150

  Fly   130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQV 194
            .|....|.       ::..||.|||.|.:||:.|::.:.....|.....|:::|.|||..||.||
Mouse   151 ETAKQREA-------EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 208

  Fly   195 WFQNSRARQKK-HIHAGKNK-------IREPEGSSFARHINLQLTYSFQNNAQNPMHLNGSKAGL 251
            ||||.||::|: ...||:.:       ::...|||.:...::|       ..|:      |.|.:
Mouse   209 WFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSIQ-------EGQD------SDAEV 260

  Fly   252 YPTHESSMDELSQDSSVHCMPSEVXLEQSSPA 283
            ..|.|.||.::...:.::.     .|.:.:||
Mouse   261 SFTDEPSMADMGPANGLYS-----SLGEPAPA 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	23/52 (44%)
		LIM2_AWH	69..123	CDD:188765	29/54 (54%)
		Homeobox	152..204	CDD:278475	23/51 (45%)
Lhx3	NP_001034742.1	LIM1_Lhx3b	33..87	CDD:188851	23/55 (42%)
		LIM2_Lhx3_Lhx4	95..150	CDD:188762	29/54 (54%)
		Homeobox	165..218	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910