Protein Alignment Awh and lmx1b

DIOPT Version :10

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: XP_002937918.1
• Gene: lmx1b / 100495130
• XenbaseID: XB-GENE-494750
• Length: 400
• Species: Xenopus tropicalis
• Alignment Length: 315
• Identity: 101/315 - (32%)
• Similarity: 150/315 - (47%)
• Gaps: 44/315 - (13%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKC 72
            |..|..||||||.:.|...|||..||:|.:|..||  ..||:.|:|:::||.||.:.|.||||.|
 Frog    56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPL--TTSCYFRDRKLFCKQDYQQLFAAKCSGC 118

  Fly    73 CRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETVE----GGTTS 133
            ...|:.:::|.||.|.|:||:||.|..|.|||..|::|.|.:.::|||:.|.:..:    |....
 Frog   119 MEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSGSPDD 183

  Fly   134 SD---------------------EGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQD 177
            ||                     :|.| ||....:.||.||..|.:|.:..:|:|::.|.|..:.
 Frog   184 SDSVKSDDEEGDVKPGKCHVNQGKGSD-DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKV 247

  Fly   178 LERIASVTGLSKRVTQVWFQNSRARQKKHIHAGKNKIREPEGSSFARHI------NLQLTYS--- 233
            .|.:|:.||||.||.||||||.||:.||.....:.:..:.......:.:      .:..:|:
 Frog   248 RETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSSRMEGMMTSYAPLA 312

  Fly   234 -----FQNNAQNPMHLNGSKAGLYPTH--ESSMDELSQDSSVHCMPSEVXLEQSS 281
                 .....||....:..:.||.|..  ...|:....|:..|.:.|:..|...|
 Frog   313 PPQQQIVTMDQNSYSTDPFQQGLTPPQMPGDHMNPYGNDTIFHDIDSDTSLTSLS 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	24/52 (46%)
		LIM2_AWH	69..123	CDD:188765	24/53 (45%)
		Homeodomain	149..205	CDD:459649	26/55 (47%)
lmx1b	XP_002937918.1	LIM1_Lmx1b	56..108	CDD:188757	25/53 (47%)
		LIM2_Lmx1a_Lmx1b	115..169	CDD:188764	24/53 (45%)
		Homeodomain	219..275	CDD:459649	26/55 (47%)