Protein Alignment Awh and lhx6

DIOPT Version :9

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: XP_002941184.1
• Gene: lhx6 / 100493242
• XenbaseID: XB-GENE-493341
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 283
• Identity: 116/283 - (40%)
• Similarity: 158/283 - (55%)
• Gaps: 40/283 - (14%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKC 72
            |::||..|.||:.|:|....||..||.|.:|...|.:..||:|:.::::||.||...||.||::|
 Frog    96 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHNSCYIKNKEIFCKMDYFSRFGTKCARC 160

  Fly    73 CRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHY---LE--------- 125
            .|.|.|||||||||...:|||||||..|.|||||||:|.|::::|||:.||   :|
 Frog   161 GRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENG 225

  Fly   126 ---TVEGGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGL 187
               |:||...|..:.      .....||.||:||.|||||:||.|..|:|||.|.|:::|.:|||
 Frog   226 NGITLEGAVPSEQDS------QPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL 284

  Fly   188 SKRVTQVWFQNSRARQKKHI--HAGKNKIREPEGSSFARHINLQLTYSFQNNAQNPMH---LNGS 247
            |:||.||||||.|||.|||.  |.     ..|:|.:..|     :|.|..::    :|   .|..
 Frog   285 SRRVIQVWFQNCRARHKKHTPQHG-----VPPQGPTPTR-----ITSSLSDD----LHFSPFNSP 335

  Fly   248 KAGLYPTHESSMDELSQDSSVHC 270
            :.....|....::...|...:||
 Frog   336 ERARMVTLHGYIESQVQCGQMHC 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	20/52 (38%)
		LIM2_AWH	69..123	CDD:188765	33/53 (62%)
		Homeobox	152..204	CDD:278475	34/51 (67%)
lhx6	XP_002941184.1	LIM1_Lhx6	96..149	CDD:188766	20/52 (38%)
		LIM2_Lhx6	157..211	CDD:188768	33/53 (62%)
		Homeobox	249..302	CDD:365835	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	86	1.000	Domainoid score	I7980
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	226	1.000	Inparanoid score	I3409
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1161127at2759
OrthoFinder	1	1.000	-	-		FOG0001821
OrthoInspector	1	1.000	-	-		otm48584
Panther	1	1.100	-	-	O	PTHR24208
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	1	1.000	-	-		X1183
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	10.100