Protein Alignment Awh and lhx9

DIOPT Version :10

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: XP_004913801.1
• Gene: lhx9 / 100489035
• XenbaseID: XB-GENE-492044
• Length: 398
• Species: Xenopus tropicalis
• Alignment Length: 335
• Identity: 108/335 - (32%)
• Similarity: 163/335 - (48%)
• Gaps: 77/335 - (22%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGA-KCSK 71
            ||.||..||||::|......||..||:||.|...|:.:.:||.::..:|||.||.:.|.. :|::
 Frog    72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSVQRCAR 136

  Fly    72 CCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLETVEG------- 129
            |..|||||:.|.||||.|:||:||.|..|.:.||||:.|.:.::.|.|:.|:...|:|
 Frog   137 CHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCRIHFELLVQGDFHQQLN 201

  Fly   130 ---------------------GTTSS------------------DEGC-------DGDGYH--KS 146
                                 ||...                  ..||       |.|..:  ..
 Frog   202 YTELSAKGGGIATLPYFSNGTGTVQKGRPRKRKSPALGVDIINYSSGCNENETDLDRDQTYPPSQ 266

  Fly   147 KTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHI---- 207
            ||||:||:|...||:.:::.|.|:.|||.:||:::|..|||:|||.||||||:||:.::::
 Frog   267 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQE 331

  Fly   208 HAGKNKIREPEGSSFARHINLQLT----YSFQNNAQNP-MHLNGSKAGLYPTHESSMDELSQDSS 267
            :.|.:|:..|..|:.|...:..||    .|..::..:| :::..|......||||.
 Frog   332 NGGGDKVEGPSLSAPASAESAALTPTGATSTLSDLTSPSLNVGASVTPNMDTHESG--------- 387

  Fly   268 VHCMPSEVXL 277
               .||:. |
 Frog   388 ---SPSQTTL 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	22/52 (42%)
		LIM2_AWH	69..123	CDD:188765	26/53 (49%)
		Homeodomain	149..205	CDD:459649	29/55 (53%)
lhx9	XP_004913801.1	LIM1_Lhx2	62..125	CDD:188853	22/52 (42%)
		LIM2_Lhx2_Lhx9	130..188	CDD:188763	26/57 (46%)
		Homeodomain	269..325	CDD:459649	29/55 (53%)