DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Awh and zfhx4

DIOPT Version :10

Sequence 1:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_012820690.1 Gene:zfhx4 / 100486096 XenbaseID:XB-GENE-957673 Length:3559 Species:Xenopus tropicalis


Alignment Length:184 Identity:55/184 - (29%)
Similarity:82/184 - (44%) Gaps:34/184 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 ETVEGGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
            |..|...:..:.|..|:..|:.  ||:|||.|.|||::|...:.:||||..:.|:.||...||.|
 Frog  2532 EKDENNCSEKEGGNSGEDQHRD--KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKK 2594

  Fly   190 RVTQVWFQNSRARQKKHIHAGKNKIREPEGSSFARHINLQLTYSFQNNAQNPMHL------NGSK 248
            ||.||||||:|||::|.........:..:...|.|.:       |:..:....|:      .|.:
 Frog  2595 RVVQVWFQNTRARERKGQFRALGPAQSHKRCPFCRAL-------FKAKSALESHIRSRHWNEGKQ 2652

  Fly   249 AG--LYPTHESSMDELSQD-----------------SSVHCMPSEVXLEQSSPA 283
            ||  |.|:...||::..:.                 ||.:.:||.|....|..|
 Frog  2653 AGYSLPPSPLISMEDGGESPNKYTYFDYVSIPKLDPSSENDLPSTVSTPVSKTA 2706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 31/55 (56%)
zfhx4XP_012820690.1 C2H2 Zn finger 641..661 CDD:275368
C2H2 Zn finger 696..713 CDD:275368
C2H2 Zn finger 1372..1392 CDD:275371
C2H2 Zn finger 1400..1421 CDD:275371
C2H2 Zn finger 1516..1540 CDD:275368
C2H2 Zn finger 1568..1586 CDD:275368
HOX 2091..2146 CDD:197696
Homeodomain 2188..2244 CDD:459649
Atrophin-1 2298..>2498 CDD:460830
COG5576 2527..2647 CDD:227863 41/123 (33%)
Homeodomain 2554..2610 CDD:459649 31/55 (56%)
Homeodomain 2877..2933 CDD:459649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.