Protein Alignment Awh and lhx1

DIOPT Version :10

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_001093698.1
• Gene: lhx1 / 100101708
• XenbaseID: XB-GENE-482482
• Length: 409
• Species: Xenopus tropicalis
• Alignment Length: 381
• Identity: 117/381 - (30%)
• Similarity: 159/381 - (41%)
• Gaps: 109/381 - (28%)

  Fly     8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKC 72
            ||.|..||.|||.|.|...:||..|::||.|.|.|  .:.||.||.::|||.|:.:.||.||:.|
 Frog     4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNL--TEKCFSREGKLYCKNDFFRRFGTKCAGC 66

  Fly    73 CRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDD-RVLCKAHYLE----------- 125
            .:|||.||.|||||..||||.||.|..|.:||||||:..::|: :.:||..||.
 Frog    67 AQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNNNNNNNAAKE 131

  Fly   126 ----TVEGGTTS---------SDEGCDGDGYHKS----------------KTKRVRTTFTEEQLQ 161
                :|.|...|         .|:..|.:..:.|                |.:..|||...:||:
 Frog   132 NSFISVTGSDPSLSPESQDPLQDDAKDSESANISDKEAGVNENDDQNLGAKRRGPRTTIKAKQLE 196

  Fly   162 VLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQK--KHIHA-GKNK---IREPE-- 218
            .|:|.|.....|.....|::|..|||:.||.||||||.|::::  |.:.| |..:   .|.|.
 Frog   197 TLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRM 261

  Fly   219 ---------------------GSSFARHINLQLTYSF------QNNAQNPMHL----NGSKAGL- 251
                                 |...:.:......|.|      .:.||.|:.|    :...||.
 Frog   262 RPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGSNYDFFPQGPPSSQAQTPVDLPFVPSSGPAGTP 326

  Fly   252 -------YPTHESSMD------------------ELSQDSSVHCMPSEVXLEQSSP 282
                   .|.|..|.|                  |.:...|:|.|.:|| ..||.|
 Frog   327 LGAMDHPIPGHHPSSDAQRFTDIMSHPPGDSPSPEPNLPGSMHSMSAEV-FGQSPP 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	25/52 (48%)
		LIM2_AWH	69..123	CDD:188765	29/54 (54%)
		Homeodomain	149..205	CDD:459649	23/57 (40%)
lhx1	NP_001093698.1	LIM1_Lhx1_Lhx5	4..55	CDD:188753	25/52 (48%)
		LIM2_Lhx1_Lhx5	63..118	CDD:188761	29/54 (54%)
		Homeodomain	184..240	CDD:459649	23/55 (42%)