DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha1 and AT5G23250

DIOPT Version :9

Sequence 1:NP_001189044.1 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_197716.1 Gene:AT5G23250 / 832389 AraportID:AT5G23250 Length:341 Species:Arabidopsis thaliana


Alignment Length:288 Identity:205/288 - (71%)
Similarity:241/288 - (83%) Gaps:6/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DSRVICQGFTGKQGTFHSQQALEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIY 101
            ::||||||.|||.||||::||:|||||:|.|::||||||:|||||||.:|||||..|..:|:|||
plant    52 NTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIY 116

  Fly   102 VPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIG 166
            ||.|.|||||:|.|.||:.||||||||:||||||:||.||.||||:||:||||||||.|.:||||
plant   117 VPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIG 181

  Fly   167 IMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPET 231
            ||||:|||.||||:||||||||||||.|||.|||||:.||||||||||||:|:||||.|..||:|
plant   182 IMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQT 246

  Fly   232 KGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDK 296
            :||:|||||||.|||.||..:.|..:.   ||||:||||::|||||||||||||:|||||.|.||
plant   247 EGIVLIGEIGGTAEEDAAALIKENGTD---KPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDK 308

  Fly   297 IAALEKAGVIVTRSPAKMG---HELFKE 321
            |.:|..|||.|..||||:|   .|||:|
plant   309 IKSLRDAGVKVVESPAKIGAAMFELFQE 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha1NP_001189044.1 PTZ00187 22..325 CDD:240307 205/288 (71%)
AT5G23250NP_197716.1 PLN00125 41..340 CDD:215066 205/288 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1058
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55785
Inparanoid 1 1.050 418 1.000 Inparanoid score I440
OMA 1 1.010 - - QHG60703
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - mtm1186
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - LDO PTHR11117
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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