DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha1 and AT5G08300

DIOPT Version :9

Sequence 1:NP_001189044.1 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_196447.1 Gene:AT5G08300 / 830726 AraportID:AT5G08300 Length:347 Species:Arabidopsis thaliana


Alignment Length:288 Identity:207/288 - (71%)
Similarity:245/288 - (85%) Gaps:6/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DSRVICQGFTGKQGTFHSQQALEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIY 101
            ::||:|||.|||.||||::||:|||||:|.|::||||||:|||||||.||||||..|..:|:|||
plant    57 NTRVLCQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLGLPVFNSVAEAKADTKANASVIY 121

  Fly   102 VPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIG 166
            ||.|.|||||:|.:|||:.||||||||:||||||:|||||.||||:||:||||||||.|.:||||
plant   122 VPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQSKTRLIGPNCPGIIKPGECKIG 186

  Fly   167 IMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPET 231
            ||||:|||.||||:||||||||||||.|||.|||||:.||||||||||||:|:||||.|..||:|
plant   187 IMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQT 251

  Fly   232 KGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDK 296
            :||:|||||||.|||.||..:..  ||.: ||||:||||::|||||||||||||:|||||.|.||
plant   252 EGIVLIGEIGGTAEEDAAALIKA--SGTE-KPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDK 313

  Fly   297 IAALEKAGVIVTRSPAKMG---HELFKE 321
            |.:|..|||.|..||||:|   :|||:|
plant   314 IKSLNDAGVKVVESPAKIGSAMYELFQE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha1NP_001189044.1 PTZ00187 22..325 CDD:240307 207/288 (72%)
AT5G08300NP_196447.1 PLN00125 46..345 CDD:215066 207/288 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1058
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55785
Inparanoid 1 1.050 418 1.000 Inparanoid score I440
OMA 1 1.010 - - QHG60703
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - mtm1186
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - O PTHR11117
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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