DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha1 and Suclg1

DIOPT Version :9

Sequence 1:NP_001189044.1 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_063932.2 Gene:Suclg1 / 56451 MGIID:1927234 Length:346 Species:Mus musculus


Alignment Length:340 Identity:223/340 - (65%)
Similarity:277/340 - (81%) Gaps:14/340 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AASMRALLKVRDGFVA-------------GVRCNSQYNKTRGNLKLNGDSRVICQGFTGKQGTFH 53
            ||:...::....|..|             |:| :..|..:|.::.::.::::|||||||||||||
Mouse     8 AAATATMVSSSSGLAAARLLSRTFLLQQNGIR-HGSYTASRKHIYIDKNTKIICQGFTGKQGTFH 71

  Fly    54 SQQALEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEAE 118
            ||||||||||||||.:|.|||.:|||||||.:|.|||:.|...|:|||||||.|||||.||::||
Mouse    72 SQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAE 136

  Fly   119 IPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSR 183
            |||:||||||:||.|||:|||.|..|..:||:||||||:|.|.:||||||||||||:|:||:|||
Mouse   137 IPLVVCITEGIPQQDMVRVKHRLTRQGTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSR 201

  Fly   184 SGTLTYEAVHQTTEVGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKA 248
            |||||||||||||:|||||:||:||||||||||||||||||||.||.|:||||||||||.|||.|
Mouse   202 SGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENA 266

  Fly   249 ADYLTEYNSGIKAKPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAK 313
            |.:|.|:|||.|||||||||||::||||||||||||||:||||||.:||:||:.|||:|:.|||:
Mouse   267 AAFLKEHNSGPKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQ 331

  Fly   314 MGHELFKEMKRLELV 328
            :|..::||.::.:::
Mouse   332 LGTTIYKEFEKRKML 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha1NP_001189044.1 PTZ00187 22..325 CDD:240307 217/302 (72%)
Suclg1NP_063932.2 PTZ00187 19..344 CDD:240307 221/325 (68%)
CoA_binding 53..146 CDD:280747 67/92 (73%)
Coenzyme A binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03222 64..67 2/2 (100%)
Coenzyme A binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03222 143..145 1/1 (100%)
Ligase_CoA 199..324 CDD:304578 103/124 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842766
Domainoid 1 1.000 216 1.000 Domainoid score I2699
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55785
Inparanoid 1 1.050 462 1.000 Inparanoid score I1546
Isobase 1 0.950 - 0 Normalized mean entropy S294
OMA 1 1.010 - - QHG60703
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - otm43932
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - LDO PTHR11117
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1411
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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