DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha1 and sucl-2

DIOPT Version :9

Sequence 1:NP_001189044.1 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_497288.1 Gene:sucl-2 / 175252 WormBaseID:WBGene00017759 Length:321 Species:Caenorhabditis elegans


Alignment Length:322 Identity:223/322 - (69%)
Similarity:256/322 - (79%) Gaps:7/322 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASMRALLKVRDGFVAGVRCNSQYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQALEYGTKLV 65
            :|::.||..:      |.| ..|.||.||.||.:|..::||.|||||:||||||:|.|||.|.||
 Worm     5 LASAARAATR------AAV-TRSVYNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLV 62

  Fly    66 GGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVP 130
            ||:||.|.|..|||||||.||||||..|...|||||||..|||.||.||::|||.|||.||||:|
 Worm    63 GGVSPNKAGQTHLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIP 127

  Fly   131 QHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQT 195
            |.|||:||:.|:.|:||||:|||||||||...||||||||||||:|.||:|||||||||||||||
 Worm   128 QQDMVRVKNRLLKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQT 192

  Fly   196 TEVGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIK 260
            |.||||||.|:||||||||||:|||||||||:|.:||||||||||||.|||:||::|...|||..
 Worm   193 TTVGLGQTRCIGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSN 257

  Fly   261 AKPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEM 322
            |||||||||||:||||||||||||||:||||.|.|||.||..|.|:||.||||:|..:.|.:
 Worm   258 AKPVVSFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha1NP_001189044.1 PTZ00187 22..325 CDD:240307 218/301 (72%)
sucl-2NP_497288.1 PTZ00187 19..319 CDD:240307 218/299 (73%)
CoA_binding 32..125 CDD:280747 63/92 (68%)
Ligase_CoA 178..303 CDD:304578 100/124 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162587
Domainoid 1 1.000 213 1.000 Domainoid score I1596
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55785
Inparanoid 1 1.050 451 1.000 Inparanoid score I901
Isobase 1 0.950 - 0 Normalized mean entropy S294
OMA 1 1.010 - - QHG60703
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - otm14814
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - O PTHR11117
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1411
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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