DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha1 and sucl-2

DIOPT Version :10

Sequence 1:NP_523905.2 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_497288.1 Gene:sucl-2 / 175252 WormBaseID:WBGene00017759 Length:321 Species:Caenorhabditis elegans


Alignment Length:322 Identity:223/322 - (69%)
Similarity:256/322 - (79%) Gaps:7/322 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASMRALLKVRDGFVAGVRCNSQYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQALEYGTKLV 65
            :|::.||..:      |.| ..|.||.||.||.:|..::||.|||||:||||||:|.|||.|.||
 Worm     5 LASAARAATR------AAV-TRSVYNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLV 62

  Fly    66 GGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVP 130
            ||:||.|.|..|||||||.||||||..|...|||||||..|||.||.||::|||.|||.||||:|
 Worm    63 GGVSPNKAGQTHLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIP 127

  Fly   131 QHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQT 195
            |.|||:||:.|:.|:||||:|||||||||...||||||||||||:|.||:|||||||||||||||
 Worm   128 QQDMVRVKNRLLKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQT 192

  Fly   196 TEVGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIK 260
            |.||||||.|:||||||||||:|||||||||:|.:||||||||||||.|||:||::|...|||..
 Worm   193 TTVGLGQTRCIGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSN 257

  Fly   261 AKPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEM 322
            |||||||||||:||||||||||||||:||||.|.|||.||..|.|:||.||||:|..:.|.:
 Worm   258 AKPVVSFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha1NP_523905.2 PTZ00187 22..325 CDD:240307 218/301 (72%)
sucl-2NP_497288.1 PTZ00187 19..319 CDD:240307 218/299 (73%)

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