DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-B and EBS3

DIOPT Version :9

Sequence 1:NP_647832.1 Gene:PIG-B / 38446 FlyBaseID:FBgn0035464 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_173134.2 Gene:EBS3 / 838261 AraportID:AT1G16900 Length:570 Species:Arabidopsis thaliana


Alignment Length:499 Identity:107/499 - (21%)
Similarity:183/499 - (36%) Gaps:165/499 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YWQSLEVAHKLTFGYGYLTWEWVQ--GIRSYVYPLL--IAG--------------LYKILALLQL 76
            ||:.|   |.:.:..|:.|||:..  .:|||:|.|.  :||              .|.:...|.|
plant    75 YWEPL---HYILYKSGFQTWEYSSNFALRSYLYILFHELAGRPASWWFGDDKVRVFYAVRLFLGL 136

  Fly    77 DSAHLLVVLPRIVQALLSAYSDYRFFVWTGKR--KWALFLILVPWFWFYTGSRTLANTLEASLTT 139
            .||....||   |.||...|         |||  .:|:.::.:....|:..:..|.::.  |:..
plant   137 VSAVSDTVL---VVALSRKY---------GKRIATYAVAMLCLTSGCFFASTSFLPSSF--SMYA 187

  Fly   140 IALS----YFPWYGESTAYL-------WPAAICCFLRPTAAVIWLPLSLYHLRRSRQNVLELILK 193
            |:||    .|..|..:.|..       ||.:|..|         ||:.:|.|           :|
plant   188 ISLSSGLLLFEKYAMAVAVSVVGVILGWPFSILAF---------LPVVIYSL-----------VK 232

  Fly   194 RF-------VLIGLLVAGLGIAIDTYWHGQLIVTPYEFLKYNIFNNIGSFYGSHPWHWYFSVGLP 251
            ||       .:..:.:.|:.:.:|.|::.:...:....|.||:.       |....|.|.:.|..
plant   233 RFKQAFIAGAVTTIFLLGVSLLVDYYYYKRWTSSVLNLLIYNVL-------GGGESHLYGTEGAL 290

  Fly   252 TVL--GINTLPFIF-------GVMETVKKSEKYPVSKQLLITI---FLTLVVLSAVEHKEFRFVS 304
            ..:  |.|...|.|       .:...:::  ||  .:.||:.|   ::.|..:|...|||.||:.
plant   291 FYIRNGFNNFNFCFILAMLFVAIYPVIRR--KY--DRALLVVISPMYIWLAFMSLQPHKEERFLY 351

  Fly   305 PLLPLCLYVITDAL---------SRWSIRASSTMLWTTAL-VILVGNVMPAWYLSTV----HQKG 355
            |:.|| :.|...|:         .::|.|.|..:..|..: .:::|.::.|.:..|.    ....
plant   352 PIYPL-ICVSASAVIENIPELFREKYSSRESLLVTITKYMRPVILGCILCASHSRTFALINGYSA 415

  Fly   356 PIELMPKLREIAREYRDE-----------REHQANILFLMPCH---------------------- 387
            |:|:...|     |:.|:           ..|:....|.:|.:                      
plant   416 PLEVYKLL-----EHHDDAGPGSVLCVGSEWHRYPSSFFVPHYISEVRWIDDGFRGLLPFPFNNT 475

  Fly   388 ------STPYYSHIHQNVTMRFL----TC----EPNLEKKEQYK 417
                  |.||:::.:|....::|    ||    |..|.:..||:
plant   476 LGGTSASPPYFNNKNQASEEQYLKNIETCTFLIELQLSRPYQYR 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-BNP_647832.1 Glyco_transf_22 5..396 CDD:281842 99/468 (21%)
EBS3NP_173134.2 Glyco_transf_22 48..451 CDD:281842 95/429 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.