DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-B and pigb

DIOPT Version :9

Sequence 1:NP_647832.1 Gene:PIG-B / 38446 FlyBaseID:FBgn0035464 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001120608.1 Gene:pigb / 100145769 XenbaseID:XB-GENE-996679 Length:528 Species:Xenopus tropicalis


Alignment Length:531 Identity:195/531 - (36%)
Similarity:291/531 - (54%) Gaps:65/531 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVFLLILAVRLASVFVVQTYYVPDEYWQSLEVAHKLTFGYGYLTWEWVQGIRSYVYPLLIAGLYK 69
            |:.|..:..|:.:..:|||.:||||||||||||||:||.||||||||.:|:|.:.|||:.|.:||
 Frog    50 YLVLAAVGFRIFNCMMVQTSFVPDEYWQSLEVAHKMTFNYGYLTWEWTEGLRGFSYPLMFATIYK 114

  Fly    70 ILALLQLDSAHLLVVLPRIVQALLSAYSDYRFFVW------TGKRKWALFLILVPWFWFYTGSRT 128
            .|.||..|....|:.:||:|||:.|..:|.|.:..      |...||..|..|..||.:|..:||
 Frog   115 ALYLLGKDHVWCLIWVPRLVQAVFSGIADIRLYSLVRHLENTELAKWVFFCQLCSWFTWYCSTRT 179

  Fly   129 LANTLEASLTTIALSYFPWYG----ESTAYLWPAAICCFLRPTAAVIWLPLSLYHLRRSRQNVLE 189
            |.||:||.|:|.||.|:|..|    .||.||...|:...:||||.::|:||..||..:.::.. :
 Frog   180 LTNTMEAVLSTFALYYYPLEGSNTKNSTKYLICVALAFLIRPTAVILWVPLLFYHFAKEKKKA-D 243

  Fly   190 LILKRFVLIGLLVAGLGIAIDTYWHGQLIVTPYEFLKYNIFNNIGSFYGSHPWHWYFSVGLPTVL 254
            |::.:::.:|:|.....:.:|..:.|:.....:.|||:|:..::|||||||||||||:.|||.:|
 Frog   244 LVVNQYLPVGILTLATSLIVDRIFFGKWTFVQWNFLKFNVLQDLGSFYGSHPWHWYFTQGLPVIL 308

  Fly   255 GINTLPFIFGVMETVKKSEKYPVSKQLLITIFLTLVVLSAVEHKEFRFVSPLLPLCLYVITDALS 319
            ..:...||.|.|...|   ||.:   ||:.:..|::..||:.||||||:.|:||:|:...     
 Frog   309 CTHLPFFIHGCMVAPK---KYQI---LLVAVGWTVLTYSALSHKEFRFIYPVLPVCMVFC----- 362

  Fly   320 RWSIRASSTMLWTTALV--ILVGNVMPAWYLSTVHQKGPIELMPKLREIAREYRDEREHQANILF 382
              ....|:...|..|.|  :::.|:.||.|...:||:|.:::||.::::.:    .....|::..
 Frog   363 --GFSFSNLKRWKKAAVGFLVLSNLFPALYTGLIHQRGALDIMPGIQKLCQ----TENSSASLFV 421

  Fly   383 LMPCHSTPYYSHIHQNVTMRFLTCEPNLEKKEQYKDEADRFFEDPVHWINSHIPMHPLTALPTHV 447
            ||||||.|:|||:|..:.|.||.|.|:|  .:.|.|||:.|:..|:.|:|:.  .:..|.||||:
 Frog   422 LMPCHSIPFYSHVHCPIKMNFLECPPDL--SDAYVDEAELFYASPLAWLNAE--FYNKTLLPTHL 482

  Fly   448 VLFDPLAENISVFL-RNYRLLHRIEHAEVTRLEGSQALVDQWSEALGAQSPNLASLLQNRQSRTG 511
            ::|..|...|..|| .||.....:.|..|.                              :.|||
 Frog   483 IMFSVLEPEILSFLTNNYVKTMSVFHTHVP------------------------------EGRTG 517

  Fly   512 RSILVYQRLKK 522
            ..|.:|:|..|
 Frog   518 SHIYMYERKSK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-BNP_647832.1 Glyco_transf_22 5..396 CDD:281842 159/402 (40%)
pigbNP_001120608.1 PMT_2 42..509 CDD:304453 186/480 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 313 1.000 Domainoid score I1288
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3570
Inparanoid 1 1.050 359 1.000 Inparanoid score I2162
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281304at33208
OrthoFinder 1 1.000 - - FOG0005162
OrthoInspector 1 1.000 - - oto103503
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3680
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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