DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32262 and plh

DIOPT Version :10

Sequence 1:NP_647831.1 Gene:CG32262 / 38445 FlyBaseID:FBgn0052262 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_649511.2 Gene:plh / 40615 FlyBaseID:FBgn0037292 Length:193 Species:Drosophila melanogaster


Alignment Length:185 Identity:43/185 - (23%)
Similarity:81/185 - (43%) Gaps:19/185 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NMFGKYLLVTNVVGSGLLMVVGDVIAQEYEYRRGLRHQD-----RFDTDRMYRMFVAGALQGPLH 130
            |:..||.::..::..|.|...|.:|.|....::..|..|     ||.   ::..|    ..||. 
  Fly     7 NITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCLRFS---LFGFF----FMGPT- 63

  Fly   131 HYVYNW--MDRVMPART-LKNIFKKILIDQLVMSPACIVIFFYSLCYLERQTLDATNQELISKFP 192
              :|.|  :..||..|| :|:...|.:.:|....|..|..|.:.:..:|..:.....:|:..||.
  Fly    64 --IYVWIRLASVMWPRTDIKSSLCKAITEQTAYDPMAISSFLFFMTLMEGNSYAEAKREVSDKFL 126

  Fly   193 YVYMLDWMTWPAAQYLNFRYLDTKYRVTFVNVCTAVYNVLMSYMKHDFGVHLPLE 247
            ..|.:..:.||..|.:||.::..:.:|.|.:..:..:...::|:|. ..:|.|::
  Fly   127 DAYKVGVIYWPCVQTVNFAFVPARNQVVFTSFFSMCWTTFLAYVKF-LQLHPPVD 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32262NP_647831.1 Mpv17_PMP22 175..234 CDD:461182 12/58 (21%)
plhNP_649511.2 Mpv17_PMP22 107..168 CDD:461182 12/60 (20%)

Return to query results.
Submit another query.