DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32264 and phactr4a

DIOPT Version :9

Sequence 1:NP_728897.1 Gene:CG32264 / 38438 FlyBaseID:FBgn0052264 Length:1008 Species:Drosophila melanogaster
Sequence 2:XP_001922280.2 Gene:phactr4a / 569383 ZFINID:ZDB-GENE-051030-69 Length:1056 Species:Danio rerio


Alignment Length:1061 Identity:251/1061 - (23%)
Similarity:359/1061 - (33%) Gaps:377/1061 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 GTRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEAASKSLERKISVRANRDELVQKGIL--MPE 348
            |...|..:.|.|..:||:.|||||||:||.|:||:..|:.||||:|||..|:||:::|:|  :||
Zfish    35 GAGNPSAKSKGKFPSLGKIFKPWKWRKKKTSDKFKETSEVLERKMSVRKPREELIERGLLKDIPE 99

  Fly   349 SPLGNI-------------PEPGEESYYNNSNSGATANG---------------------SLLNS 379
            :...::             |.||:    ..|:||:....                     |.:.|
Zfish   100 NESNDVNHKAPPVKNGHTGPVPGD----RKSDSGSEVKAPSSRPQGEDQRNSCAPEAERRSRVPS 160

  Fly   380 AVHNNSM-----------------SQANNSINATTGN-PLISAAQ-----------QQLN----- 410
            .|..|..                 |:..:.....||: ||....|           ::.|     
Zfish   161 DVSRNRQPLDVDAQTRIPTEPDRRSRLESDYEKRTGSLPLDRPGQEDGRYRREEREEKANREKER 225

  Fly   411 -----------------------------QGL--------------------------------- 413
                                         ||.                                 
Zfish   226 RDRKDDRDVRGERRDDRDKHDKRPDKENWQGRDDREKERRNDREKREEKDWRDNRDRKQPRDRKE 290

  Fly   414 -------PNSI-------------------------------------SVQQFNGQNQNPQNSM- 433
                   |..:                                     :.|..:|:...||:.| 
Zfish   291 EHERRDEPERVDDRERKEQIERREERDKREERDRREEKGRRDVRRPEPAKQVSDGKLTRPQSEMD 355

  Fly   434 ----------ANGL----VGGGGGGG------DGSSDTSSLSGG-----VPHSQSAPQQLGVGQP 473
                      .|||    |.......      .|..:|.:..|.     ||..:.|.......||
Zfish   356 MRPVLSKSISDNGLKVRPVSEALQSSTLLRYTSGEEETRTRKGSVGVQFVPEPKPASTSTKESQP 420

  Fly   474 PPPLTPLAQHHQALAQQLQQRFAISNNNEPRK-----DKTDAQQQQHGGNGTISTPNIEQPTCQG 533
            ||        .||:... ::..|..::.||..     ....:.......:.:.|.|.|.:     
Zfish   421 PP--------KQAILPP-KRVIAAPSSAEPAPVPPSFSSLSSSSSSSSSSSSSSAPPIAK----- 471

  Fly   534 SMLPPPGGGGHHQVDGSGKMERPNTLAGANKLT------RRGVNICYHN------EHM----YGE 582
               |||.....:..|.|..:..|:.:||..::.      .....:..|.      .||    ...
Zfish   472 ---PPPRTVSLNVDDSSRTILIPSLIAGDREVPPTVPAHTTPATVSTHKTLPTVPAHMTPPTVPA 533

  Fly   583 DGKMVGGPPGSTPPPYPGGKLPPGVMLSELPEPPIPLSEIGPIPPPPMFSTPSPTLIAGRPHGPG 647
            .......|..|.||.......||.|.....|..|:||.: .|:|||......|.|          
Zfish   534 HVTTPAAPAHSNPPAVLPHSTPPTVPKHPTPAAPVPLKQ-PPMPPPKPVHHSSNT---------- 587

  Fly   648 AVNDQDYQQDYDYDDNDPDQ------DELDSD-----DEYAPYGGNHVRMMD-------TQRVEE 694
            |:.....|:   |..:.|.|      .:..|.     ..|....|..:|.:|       .:|...
Zfish   588 ALQASTLQR---YHKSPPPQYWKSWRQQAGSGVYLSLPTYLSQRGAQLRPVDPSQVPVPVKRSPP 649

  Fly   695 IPAKE---------------------PKPNAVPLKSAL---------------KKKGGMQPASAS 723
            ||.|.                     |.|.:||:.:|.               ...||..|....
Zfish   650 IPPKRNTPVTKRNSGDSSANLPEPPPPAPTSVPIPAAAPISAPPSTQSDDSKNSNSGGFSPPPPH 714

  Fly   724 TPVTPTQEH--------GAGSAAT--------------AAAMANSNGGIGSMAAAAAAAAQQSAN 766
            .|.:|.:.|        ...|..|              .....||.|.:......:..|......
Zfish   715 IPPSPPRAHQPHEVIRVDPPSPTTEPPSQPPPLPLHIRIQRALNSPGPVHPNPEGSQRAHSLLFE 779

  Fly   767 QRPLVVRQDAAGNNYSLKPILRPRIRLCRQQMFNI--------------QLPCTVENKENARPFV 817
            ..|.::.:...|..|||...:.| :||.....|::              |.|   |.:..:|..:
Zfish   780 TPPDLINEALGGGRYSLPVTIEP-LRLPEDDDFDMEEELQKLRAGPRPTQKP---ELEPRSRRGL 840

  Fly   818 IR----------------ESSSDSDDSDGHIVYRD---EDNDNTRLAK------LARKESLSLKL 857
            :.                |...|..|||..|.|||   ||:|...:.|      :.||::|:|||
Zfish   841 VEDPQVAVIPEDAGSESSEEEEDESDSDQSIKYRDDNEEDDDEEDVPKSGLASRVKRKDTLALKL 905

  Fly   858 QLRPDKQDLINRNILHQVNDNELKESKEAIGARLIRRLSMRPTAEELVERNILKTQSPAEEKKQK 922
            :.:.:|:.....:.....|..:.:..:..||..|.||||.||||:||.:||||..::....:.::
Zfish   906 ERQQEKEKSQEEDSSTWNNKEQWEAVRNKIGTALTRRLSQRPTAQELEQRNILLAKNEEVRRAER 970

  Fly   923 EEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWTRLTPKDKAAIRKELNE 987
            .|.|..|.||||.|||:.:|:.:||:||::|:|.|.|.|||||||||||:|||.|||||||||||
Zfish   971 SEIKRRLTRKLSQRPTIADLQARKILRFHEYVESTHAQDYDRRADKPWTKLTPADKAAIRKELNE 1035

  Fly   988 FKSSEMAVHEGSRHLTRFHRP 1008
            ||||||.|||.||..||||||
Zfish  1036 FKSSEMEVHEESRIFTRFHRP 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32264NP_728897.1 RPEL 325..347 CDD:280851 12/23 (52%)
RPEL 851..876 CDD:128947 5/24 (21%)
RPEL 889..914 CDD:128947 15/24 (63%)
RPEL 927..952 CDD:128947 13/24 (54%)
phactr4aXP_001922280.2 RPEL 939..958 CDD:280851 13/18 (72%)
RPEL 975..998 CDD:128947 11/22 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580192
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12751
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X711
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.800

Return to query results.
Submit another query.