DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32264 and phactr4

DIOPT Version :9

Sequence 1:NP_728897.1 Gene:CG32264 / 38438 FlyBaseID:FBgn0052264 Length:1008 Species:Drosophila melanogaster
Sequence 2:XP_012811928.2 Gene:phactr4 / 100145319 XenbaseID:XB-GENE-5930004 Length:883 Species:Xenopus tropicalis


Alignment Length:882 Identity:254/882 - (28%)
Similarity:384/882 - (43%) Gaps:222/882 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 EKRQLIASSLSLSDILHSSNAQQQQQQAAKDGLAINGGQCAKKQNGAAIRTNS--------LGSG 286
            ::.:.:.:...:|....||...::....:|:||:    |.......:.:...|        :.|.
 Frog   121 QRNKGVNTGKGISRTYSSSQTYRETSGPSKNGLS----QIPSPPRASDMEDRSEEGGDHTAMPSA 181

  Fly   287 TRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEAASKSLERKISVRANRDELVQKGILMPESPL 351
            ..|||.:||||.:..|:||||||||::|.|:.|...|:.||||||:|..|:|||::|:|: |.|.
 Frog   182 PSTPPSKRKSKFAGFGKFFKPWKWRKRKSSDSFRETSEVLERKISMRKPREELVKRGLLV-EVPE 245

  Fly   352 GNIPEPGEESYYNNSN-SGATAN-----GSLLNSAVHNNSMSQANNSINATTGNPLISAAQQQLN 410
            .::..|.|.....|.: |...||     |.|......:::.|:..:  ..||..|..:|....:.
 Frog   246 EDVSIPSESPPLRNGHMSVEHANPPEDIGGLKRKTRQDSTGSRPKS--GETTVQPRATAEVAPVE 308

  Fly   411 QGLPNSI-SVQQFNGQNQNPQNSMANGLVGGGGGGGDGSSDTSSLSGGVPH---SQSAPQQ---- 467
            ......: |||........|...:|                |:.:| .|.|   ::.||.|    
 Frog   309 PCTATEVASVQPHATAEVAPIQPLA----------------TAEVS-PVQHCATAEVAPVQPRPV 356

  Fly   468 --LGVGQPPPPLTPLAQHHQALAQQLQQRFAISNNNEP---RKDKTDAQQQQHGGNGTISTPNIE 527
              :...||.|....:..|.:.|:::..:::...:...|   |.....|..|:      :|....:
 Frog   357 SEVASVQPCPVSEVVPVHPRHLSEKNSEKYRPMSEVAPGASRPTSEVAPLQK------VSRDFSK 415

  Fly   528 QPTCQGSMLPPPGGGGHHQVDGSGKMERPNTLAGANKLTRRGVNICYHNEHMYGEDGKMVGGPPG 592
            ||     :|||               :||  |:.::.:|:..|                :||   
 Frog   416 QP-----LLPP---------------KRP--LSSSSSVTQESV----------------LGG--- 439

  Fly   593 STPPPYPGGKLPPGVMLSELPEP----PIPLSEIGPIPPPPMFSTPSPTLIAGRPHGPGAVNDQD 653
              ..|.|..:....|   .:|.|    |:|.|:..|:|||...:..|..|:|             
 Frog   440 --QKPDPSTRQQSSV---PVPTPRTIHPLPFSKQPPVPPPKPQNRSSNPLMA------------- 486

  Fly   654 YQQDYDYDDNDPDQDELDSDDEYAPYGGNHVRMMDTQRVEEIPAKEPKPNAVPLKSAL-KKKGGM 717
                           ||.     ...||:.:....::....||   ||...||...|: .|:..:
 Frog   487 ---------------ELS-----LALGGSTLSPAGSRPSPPIP---PKRVVVPSTDAVNNKEKAL 528

  Fly   718 QPASASTPVTPTQEHGAGSAATAAAMAN---SNGGIGSMAAA---AAAAAQQSANQRPLVVRQDA 776
            :|  ||.|..|..|....|..:....::   ||..:..:..|   .....:|||:..||.:|...
 Frog   529 RP--ASLPPIPANEISIPSPPSPPISSHIPVSNPPVPMLTLAPPNTEVEKEQSASPLPLHIRIQQ 591

  Fly   777 AGNNYSLKPILRPRIRLCRQQMFNIQ-------------LPCTV--------------------- 807
            |.|:....|:|....|  .|.:..:|             ||.|:                     
 Frog   592 ALNSPQPLPLLDSSQR--AQSLLFMQNEVPSEEGTRVRSLPVTIELLKVPDDDDDDNSLEDESLS 654

  Fly   808 -ENKE------------------NARPFVIRESSSDSD------DSDGHIVYRDED-----NDNT 842
             |:.|                  |..|..::|...:.:      ||:|.::||::|     .:.:
 Frog   655 PESSESHPSRVYIGDVPSVTVIPNYLPTCVQEEEEEEEEGVSDTDSEGPVLYREDDEEEEEEETS 719

  Fly   843 RLA-KLARKESLSLKLQLRPDKQDLINRNILHQVNDNELKESKEAIGARLIRRLSMRPTAEELVE 906
            .|| |:.||::|::||..|....|  :.....|.:..|..:.::.||::|.||||.||:||||.:
 Frog   720 SLANKVKRKDTLAMKLSGRMGPHD--SNPEFPQRSREEWNQIRQQIGSQLNRRLSQRPSAEELEQ 782

  Fly   907 RNILKTQSPAEEKKQKEEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWT 971
            ||||: ::.|:...:|:|.|..|.||||.||||.||.|:||:|||:|:|||.|||||||||||||
 Frog   783 RNILQ-KNEADRLAEKKEIKRRLTRKLSQRPTVAELVERKILRFNEYVEVTDAHDYDRRADKPWT 846

  Fly   972 RLTPKDKAAIRKELNEFKSSEMAVHEGSRHLTRFHRP 1008
            ||||.||||||||||||||:||||||.|:|.||||||
 Frog   847 RLTPADKAAIRKELNEFKSTEMAVHEESKHFTRFHRP 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32264NP_728897.1 RPEL 325..347 CDD:280851 13/21 (62%)
RPEL 851..876 CDD:128947 6/24 (25%)
RPEL 889..914 CDD:128947 15/24 (63%)
RPEL 927..952 CDD:128947 16/24 (67%)
phactr4XP_012811928.2 PHA03247 <157..537 CDD:223021 115/489 (24%)
RPEL 767..789 CDD:397053 15/22 (68%)
RPEL 802..827 CDD:128947 16/24 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 110 1.000 Domainoid score I6227
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47912
Panther 1 1.100 - - O PTHR12751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3634
SonicParanoid 1 1.000 - - X711
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.040

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