DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10862 and Ubc84D

DIOPT Version :9

Sequence 1:NP_647823.1 Gene:CG10862 / 38437 FlyBaseID:FBgn0035455 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster


Alignment Length:145 Identity:48/145 - (33%)
Similarity:75/145 - (51%) Gaps:3/145 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 RLRREISEFSTDQTEGCK-AEMVGDNLFHWVATIPGPSETVYEGGRFRVEIVFPRNYPFYPPYLA 275
            ||.||:|:....:....: .|...::|..|...:. |.:..|..|.||:||.||..|||.||.:.
  Fly     6 RLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKIL 69

  Fly   276 FLTKTYHCNIALSGRICLDILGS-KWSPALSVSKVLISIMSLLADPNPHDPMEVSVADVFKGNRA 339
            |.||.||.|:...|.:||.|:.: .|.|.....:||.::::::.:|.|..|:...:|:.|.....
  Fly    70 FKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHK 134

  Fly   340 LHDKNAREWTKKYAK 354
            ...|.|.|:|||.|:
  Fly   135 KFMKTAEEFTKKNAE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10862NP_647823.1 COG5078 207..354 CDD:227410 47/143 (33%)
UQ_con 212..349 CDD:278603 44/138 (32%)
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 48/145 (33%)
UBCc 6..149 CDD:214562 47/143 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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