DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10862 and ube2nb

DIOPT Version :10

Sequence 1:NP_647823.1 Gene:CG10862 / 38437 FlyBaseID:FBgn0035455 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_956636.1 Gene:ube2nb / 393313 ZFINID:ZDB-GENE-040426-1291 Length:154 Species:Danio rerio


Alignment Length:155 Identity:63/155 - (40%)
Similarity:88/155 - (56%) Gaps:8/155 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 SGIPTQGDPLTITRLRREISEFSTDQTEGCKAEMVGDNLFHWVATIPGPSETVYEGGRFRVEIVF 263
            :|:|        .|:.:|......:...|.|||....|..::...|.||.::.:|||.|::|:..
Zfish     2 AGLP--------RRIIKETQRLLAEPVPGIKAEPDEGNARYFHVVIAGPQDSPFEGGTFKLELFL 58

  Fly   264 PRNYPFYPPYLAFLTKTYHCNIALSGRICLDILGSKWSPALSVSKVLISIMSLLADPNPHDPMEV 328
            |..||...|.:.|:||.||.|:...||||||||..||||||.:..||:||.:||:.|||.||:..
Zfish    59 PEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 123

  Fly   329 SVADVFKGNRALHDKNAREWTKKYA 353
            .||:.:|.|.|...:.||.||:.||
Zfish   124 DVAEQWKSNEAQAIETARTWTRLYA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10862NP_647823.1 UBCc_UEV 212..352 CDD:483950 59/139 (42%)
ube2nbNP_956636.1 UBCc_UBE2N 4..147 CDD:467433 60/150 (40%)

Return to query results.
Submit another query.