DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG10862 and Ube2k

DIOPT Version :9

Sequence 1:	NP_647823.1	Gene:	CG10862 / 38437	FlyBaseID:	FBgn0035455	Length:	354	Species:	Drosophila melanogaster
Sequence 2:	XP_038947644.1	Gene:	Ube2k / 289623	RGDID:	1311626	Length:	210	Species:	Rattus norvegicus

Alignment Length:	164	Identity:	61/164 - (37%)
Similarity:	90/164 - (54%)	Gaps:	21/164 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   208 LTITRLRREI-----------------SEFSTDQTEGCKAEMVGDNLFHWVATIPGPSETVYEGG 255
            |.:.||||..                 :|.|.:|   .|.::|.:|.......|.||.:|.||||
  Rat     3 LPLERLRRPPGSAWCACADPAPFWWPGAETSKNQ---IKVDLVDENFTELRGEIAGPPDTPYEGG 64

  Fly   256 RFRVEIVFPRNYPFYPPYLAFLTKTYHCNI-ALSGRICLDILGSKWSPALSVSKVLISIMSLLAD 319
            |:::||..|..|||.||.:.|:||.:|.|| :::|.||||||..:|:.|:::..||:|:.:|||.
  Rat    65 RYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAA 129

  Fly   320 PNPHDPMEVSVADVFKGNRALHDKNAREWTKKYA 353
            ..|.||.:..||:.:|.|..:..:.||.|...||
  Rat   130 AEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 163

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10862	NP_647823.1	COG5078	207..354	CDD:227410	61/164 (37%)
CG10862	NP_647823.1	UQ_con	212..349	CDD:278603	57/154 (37%)
Ube2k	XP_038947644.1	UBCc	35..159	CDD:238117	51/126 (40%)
Ube2k	XP_038947644.1	UBA_II_E2_UBE2K	173..210	CDD:270573
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000