DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10862 and ube2d4

DIOPT Version :9

Sequence 1:NP_647823.1 Gene:CG10862 / 38437 FlyBaseID:FBgn0035455 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_012814892.1 Gene:ube2d4 / 100497147 XenbaseID:XB-GENE-962537 Length:159 Species:Xenopus tropicalis


Alignment Length:138 Identity:74/138 - (53%)
Similarity:98/138 - (71%) Gaps:0/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 EISEFSTDQTEGCKAEMVGDNLFHWVATIPGPSETVYEGGRFRVEIVFPRNYPFYPPYLAFLTKT 280
            |:.:...|....|.|..||::||||.|||.||:::.::||.|.:.|.||.:|||.||.:||.||.
 Frog    21 ELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKI 85

  Fly   281 YHCNIALSGRICLDILGSKWSPALSVSKVLISIMSLLADPNPHDPMEVSVADVFKGNRALHDKNA 345
            ||.||..:|.||||||.|:|||||:|||||:||.|||.||||.||:...:|..:|.:|..:::.|
 Frog    86 YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLA 150

  Fly   346 REWTKKYA 353
            ||||:|||
 Frog   151 REWTQKYA 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10862NP_647823.1 COG5078 207..354 CDD:227410 74/138 (54%)
UQ_con 212..349 CDD:278603 69/132 (52%)
ube2d4XP_012814892.1 COG5078 21..159 CDD:227410 74/138 (54%)
UBCc 21..158 CDD:294101 72/136 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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