DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and SWI5

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_010430.1 Gene:SWI5 / 851724 SGDID:S000002553 Length:709 Species:Saccharomyces cerevisiae


Alignment Length:676 Identity:144/676 - (21%)
Similarity:244/676 - (36%) Gaps:169/676 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SNSNGAYGCAPLYDGAPYEVALGYGGAVVASTGGATSSDKEYLYETKNKEALYADPLDDPYQRPV 230
            ||:.|:...:...:|....:|....|.::....|.|:   |.:....|...|...||.|.....|
Yeast    27 SNARGSDPSSYAIEGEYKTLATDDLGNILNLNYGETN---EVIMNEINDLNLPLGPLSDEKSVKV 88

  Fly   231 L---------WDDITTSIQNIDPENALMLSSSGSSNNNGSSNSSSNTGESAT-SQLP-QVKMEAI 284
            .         |..:...::|...|  :.|:::...|.|..:..|..|....| |..| ..|..::
Yeast    89 STFSELIGNDWQSMNFDLENNSRE--VTLNATSLLNENRLNQDSGMTVYQKTMSDKPHDEKKISM 151

  Fly   285 DESLLETFSTPLLSPLEIKT-------EKQQRQQQHQHQQQQQQQQQQQQQHQQQHQQQYQQQHY 342
            .::||.|     ::..||..       |...:|||...:|.:.||:..::...:..|.||:||..
Yeast   152 ADNLLST-----INKSEINKGFDRNLGELLLQQQQELREQLRAQQEANKKLELELKQTQYKQQQL 211

  Fly   343 QQHYQQQHLYQHHPSLALP--GLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGN 405
            |...:.    ...|....|  .:.||              .::::...::|.||.::.|..|:..
Yeast   212 QATLEN----SDGPQFLSPKRKISPA--------------SENVEDVYANSLSPMISPPMSNTSF 258

  Fly   406 TSS-----YQQQYASQLVSGSG-----------GGYLNGS--SSNSYGYSWHSSQSFHTKY--QI 450
            |.|     .:|:|..|..:.||           .|: |.|  |......:.:.:.|..||:  ..
Yeast   259 TGSPSRRNNRQKYCLQRKNSSGTVGPLCFQELNEGF-NDSLISPKKIRSNPNENLSSKTKFITPF 322

  Fly   451 HPPSAAASATA-SATATPT-----AQLGAQQQQQQQQQQQL------------------------ 485
            .|.|..:|||: ||..||.     .::..:.|:.:..::.|                        
Yeast   323 TPKSRVSSATSNSANITPNNLRLDFKINVEDQESEYSEKPLGLGIELLGKPGPSPTKSVSLKSAS 387

  Fly   486 ---QQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRR 547
               ....|.:..:|||.:..|:|||         ::...||..........|..|....||    
Yeast   388 VDIMPTIPGSVNNTPSVNKVSLSSS---------YIDQYTPRGKQLHFSSISENALGINAA---- 439

  Fly   548 TTP---PPPYQQGHVMGLINP-PPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQV 608
             ||   ||..|..|..|:.|. .|.:                 ||..|.......::.:|:.:.|
Yeast   440 -TPHLKPPSQQARHREGVFNDLDPNV-----------------LTKNTDNEGDDNEENEPESRFV 486

  Fly   609 PQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRI---------- 663
            ..:.|.|..:|     :.::....|....||..:.:..|      |:|....|::          
Yeast   487 ISETPSPVLKS-----QSKYEGRSPQFGTHIKEINTYTT------NSPSKITRKLTTLPRGSIDK 540

  Fly   664 ---------HHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHT 719
                     ..|.|.||:|.:.:..::::|.:.|..::||:|..|.|:..|.|:.:|.||.:.|.
Yeast   541 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 605

  Fly   720 GAKPFKCIVCERSFARSDHLALHMKR 745
             .|.:.| .|.:.|.|.|.|.:|..|
Yeast   606 -EKAYAC-PCGKKFNREDALVVHRSR 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 23/101 (23%)
C2H2 Zn finger 671..688 CDD:275368 3/16 (19%)
C2H2 Zn finger 696..718 CDD:275368 8/21 (38%)
zf-H2C2_2 710..735 CDD:463886 8/24 (33%)
C2H2 Zn finger 726..746 CDD:275368 8/20 (40%)
SWI5NP_010430.1 COG5048 124..630 CDD:227381 124/574 (22%)
C2H2 Zn finger 552..574 CDD:275368 6/21 (29%)
C2H2 Zn finger 582..604 CDD:275368 8/21 (38%)
C2H2 Zn finger 611..627 CDD:275368 6/16 (38%)

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