DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and klf11

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_012818552.1 Gene:klf11 / 733909 XenbaseID:XB-GENE-956858 Length:500 Species:Xenopus tropicalis


Alignment Length:331 Identity:98/331 - (29%)
Similarity:128/331 - (38%) Gaps:109/331 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 HTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPST---------PSTS 500
            ||.::..|.......|.:....|.|       .:..|.::..||.|.:.|.:         |.|.
 Frog   218 HTLHRPQPKHPCTGNTEAGNQQPVA-------FENDQPKEANQLLPISVPVSSSPLLCQMIPVTG 275

  Fly   501 SSSISSSSASSASRHMFVPPLTPPSSD---PGSPGSSMVAAAAAAAAQRRTTPPPPYQQGHVMGL 562
            .:.:.|:         |:.|.:.|.|:   |..|.||.|:......|        |..||.:| |
 Frog   276 QAGVISA---------FIKPPSQPISNTVKPILPQSSPVSQPVLMGA--------PVSQGALM-L 322

  Fly   563 INP-----------PPTLQLLGGAATGSNNSCTTTLTTLTPASA-IQQQQQQPQQQQVPQQQPPP 615
            :.|           |.||..:|          .|.|..|.||.. |...|..|.|.         
 Frog   323 VLPQAPIPQSPQQCPQTLVAVG----------NTKLLPLAPAPVFIASGQSSPPQM--------- 368

  Fly   616 TPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSH 680
                                                     :..:||.:.|:|.||.|.|.||||
 Frog   369 -----------------------------------------DFSRRRNYVCNFSGCRKTYFKSSH 392

  Fly   681 LKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKR 745
            ||||.|.||||||::|.|..|:.:|||||||:||.|.|||.|.|.|.||:|.|.|||||..|.:|
 Frog   393 LKAHLRTHTGEKPFSCNWEGCDKKFARSDELSRHRRTHTGEKKFACPVCDRRFMRSDHLTKHARR 457

  Fly   746 HLPKNK 751
            |:...|
 Frog   458 HMTTKK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 40/82 (49%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:463886 15/24 (63%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
klf11XP_012818552.1 KLF11_N 31..376 CDD:409242 45/242 (19%)
PHA03247 <94..340 CDD:223021 31/146 (21%)
COG5048 360..>431 CDD:227381 39/120 (33%)
C2H2 Zn finger 381..400 CDD:275368 13/18 (72%)
C2H2 Zn finger 408..430 CDD:275368 13/21 (62%)
zf-C2H2 436..458 CDD:395048 12/21 (57%)
C2H2 Zn finger 438..458 CDD:275368 11/19 (58%)

Return to query results.
Submit another query.