DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and klf17

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_571798.1 Gene:klf17 / 65238 ZFINID:ZDB-GENE-010129-1 Length:409 Species:Danio rerio


Alignment Length:569 Identity:129/569 - (22%)
Similarity:178/569 - (31%) Gaps:287/569 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 VLWDDITTSIQNID-PENALMLSSSGSS-----NNNG---------SSNSSSNTGESATSQL--P 277
            :|.:.:|:...|.. |..|..|..|..|     :::|         .:|.:|..|.|..::|  |
Zfish    77 ILSNTVTSDNDNTSAPPPAYSLPESPESCSTVYDSDGCHPTPNAYCGTNFNSRPGHSLVAELFTP 141

  Fly   278 QVK----------MEAIDESLLETFSTPLLSPLEIKTEKQQRQQQH-------------QHQQQQ 319
            .:.          ::.::.:.|...:|              |.|||             ::|:|.
Zfish   142 DMNYQGEYNLKGHLDRLEYTELRALNT--------------RNQQHLTNSNNAGYKIKTENQEQS 192

  Fly   320 QQQQQQQQQH--QQQHQQQYQQQHYQQHYQQQHLYQHHPSLALPGLPPAV----DVVELQLQQQH 378
            .........|  .|:.|:..|.|.|..|.||.             :|..:    |.:..::..||
Zfish   193 CMMVNDYMGHYYAQEPQRVMQHQTYGHHVQQD-------------VPRDILGRKDCILTEMNTQH 244

  Fly   379 -----QQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQQQYASQLVSGSGGGYLNGSSSNSYGYSW 438
                 .|||.:                    |.:.:..|||.                       
Zfish   245 HIDISHQQQFI--------------------NNAHFPPQYAQ----------------------- 266

  Fly   439 HSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSS 503
                  |.:|..|                                                    
Zfish   267 ------HQQYHGH---------------------------------------------------- 273

  Fly   504 ISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRTTPPPPYQQGHVMGLINPPPT 568
                      .:||..||.  ::.|..||..:.                             ||:
Zfish   274 ----------FNMFSEPLR--ANHPAMPGVMLT-----------------------------PPS 297

  Fly   569 LQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPPPTPRSSGGGRRGRHSHHQP 633
            ..|||..:                                |:...|         :|||.|..:.
Zfish   298 SPLLGFLS--------------------------------PEDSKP---------KRGRRSWARK 321

  Fly   634 GTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQW 698
            .||.                          |.|:|.||.|.||||||||||.|.|||||||.|.|
Zfish   322 RTAT--------------------------HSCEFPGCGKTYTKSSHLKAHMRTHTGEKPYHCSW 360

  Fly   699 PECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHL 747
            ..|.|:||||||||||||||||.:||:|.:|||:|:||||||||||||:
Zfish   361 EGCGWKFARSDELTRHYRKHTGHRPFQCHLCERAFSRSDHLALHMKRHM 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 44/82 (54%)
C2H2 Zn finger 671..688 CDD:275368 13/16 (81%)
zf-H2C2_2 680..707 CDD:290200 18/26 (69%)
C2H2 Zn finger 696..718 CDD:275368 16/21 (76%)
zf-H2C2_2 710..735 CDD:290200 18/24 (75%)
C2H2 Zn finger 726..746 CDD:275368 15/19 (79%)
klf17NP_571798.1 COG5048 <248..>393 CDD:227381 78/353 (22%)
zf-C2H2 326..350 CDD:278523 17/23 (74%)
C2H2 Zn finger 331..350 CDD:275368 14/18 (78%)
zf-H2C2_2 342..>358 CDD:290200 13/15 (87%)
C2H2 Zn finger 358..380 CDD:275368 16/21 (76%)
zf-H2C2_2 372..397 CDD:290200 18/24 (75%)
C2H2 Zn finger 388..408 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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