DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and Klf6

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_113830.2 Gene:Klf6 / 58954 RGDID:62389 Length:317 Species:Rattus norvegicus


Alignment Length:286 Identity:98/286 - (34%)
Similarity:131/286 - (45%) Gaps:88/286 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 QQQQQQQQLQQLCPPAAPSTPSTS----------SSSISSSSASSASRHMFVPPLTPPSSDPGSP 531
            ::::::.:|:....|...|..|:.          :|.:||.|:.|:..   :.|.|..:|||   
  Rat   105 RERKEESELKISSSPPEDSLISSGFNYNLETNSLNSDVSSESSDSSEE---LSPTTKFTSDP--- 163

  Fly   532 GSSMVAAAAAAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAI 596
                                                    :|.....|.|..::.::|...:..:
  Rat   164 ----------------------------------------IGEVLVNSGNLSSSVISTPPSSPEV 188

  Fly   597 QQQQQQ-----PQQQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNP 656
            .::..|     |...        |:|.....|..|:......|.|                  :|
  Rat   189 NRESSQLWGCGPGDL--------PSPGKVRSGTSGKSGDKGSGDA------------------SP 227

  Fly   657 ELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGA 721
            : .:||:|.|.|.||.||||||||||||||.|||||||.|.|..||||||||||||||:||||||
  Rat   228 D-GRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGA 291

  Fly   722 KPFKCIVCERSFARSDHLALHMKRHL 747
            |||||..|:|.|:|||||||||||||
  Rat   292 KPFKCSHCDRCFSRSDHLALHMKRHL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 52/82 (63%)
C2H2 Zn finger 671..688 CDD:275368 15/16 (94%)
zf-H2C2_2 680..707 CDD:290200 21/26 (81%)
C2H2 Zn finger 696..718 CDD:275368 17/21 (81%)
zf-H2C2_2 710..735 CDD:290200 19/24 (79%)
C2H2 Zn finger 726..746 CDD:275368 14/19 (74%)
Klf6NP_113830.2 COG5048 211..>299 CDD:227381 60/106 (57%)
zf-C2H2 234..258 CDD:278523 19/23 (83%)
C2H2 Zn finger 239..258 CDD:275368 16/18 (89%)
zf-H2C2_2 250..>266 CDD:290200 14/15 (93%)
C2H2 Zn finger 266..288 CDD:275368 17/21 (81%)
zf-H2C2_2 280..305 CDD:290200 19/24 (79%)
C2H2 Zn finger 296..316 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D416605at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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