DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and znf534

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_012823677.1 Gene:znf534 / 448416 XenbaseID:XB-GENE-1219092 Length:423 Species:Xenopus tropicalis


Alignment Length:531 Identity:163/531 - (30%)
Similarity:217/531 - (40%) Gaps:164/531 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 SNTGESAT-SQLPQVKM--EAIDESLLETFSTPLLSPLEIKTEKQQRQQQHQHQQQQQQQQQQQQ 327
            ::..|||. |||..|.|  |.:::|.:.....|.:..|                    ..|.:..
 Frog     5 TSPSESAVYSQLKPVNMSVEGVEDSGVFEDIKPAIRML--------------------ASQPELS 49

  Fly   328 QHQQQHQQQYQQQHYQQHYQQQHLYQHHPSLAL--------PGLPPAVDVVELQLQQQHQQQQHL 384
            :|::....:|.......|......|:...:..:        |..|.:|::..:.....|.:....
 Frog    50 EHERAEMDKYLLSQVPLHILSDKKYRRESASVVDEFFEAEKPQAPYSVNINVILPDTAHLRTGLY 114

  Fly   385 QHNNSSSSSPKLAT-PGDNSGNTSS-------------------------YQQQYASQLVSGSGG 423
            :.:.:.:..|::.| ||.|.....|                         :.:|.|...|..|..
 Frog   115 RPSKTFTVLPQVKTEPGSNFAQPCSASLTQTLPDFTSVFSMPHSVAVNNIFIKQEAPSEVPLSAP 179

  Fly   424 GYLNG-----SSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQ 483
            ..:..     |.:|.   :...:||..|...::..|....||.:...:|..| .|:.||.:|.|.
 Frog   180 ASIQPQVYPMSMANE---TLSLAQSSGTTSVVNSISGVTMATHNGGPSPLPQ-PARIQQVKQYQT 240

  Fly   484 QLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRT 548
            ..|.:.|        .|.....|...|       :|| :||:|.||||.:               
 Frog   241 LGQDVVP--------VSGQFYHSPGVS-------LPP-SPPNSQPGSPEN--------------- 274

  Fly   549 TPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQP 613
                   |..:|..|:|||:.:...|.                       :..|||         
 Frog   275 -------QPELMNTISPPPSYEATFGL-----------------------KLVQPQ--------- 300

  Fly   614 PPTPRSSGGGRRGRHSHHQPGTAAHIASLMSV-------RTV-RYNRRNNPELEKRRIHHCDFVG 670
                          |.|..|      :|::||       .|| :|||||||||||||||||||.|
 Frog   301 --------------HIHTVP------SSMVSVLPQGQVIMTVPKYNRRNNPELEKRRIHHCDFPG 345

  Fly   671 CSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFAR 735
            ||||||||||||||||.|||||||.|.|..|:||||||||||||||||||||||||..|.|.|:|
 Frog   346 CSKVYTKSSHLKAHQRTHTGEKPYKCAWEGCDWRFARSDELTRHYRKHTGAKPFKCAACGRCFSR 410

  Fly   736 SDHLALHMKRH 746
            |||||||||||
 Frog   411 SDHLALHMKRH 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 71/90 (79%)
C2H2 Zn finger 671..688 CDD:275368 16/16 (100%)
zf-H2C2_2 680..707 CDD:290200 20/26 (77%)
C2H2 Zn finger 696..718 CDD:275368 17/21 (81%)
zf-H2C2_2 710..735 CDD:290200 20/24 (83%)
C2H2 Zn finger 726..746 CDD:275368 14/19 (74%)
znf534XP_012823677.1 Meiotic_rec114 <169..287 CDD:367544 37/159 (23%)
COG5048 <246..>423 CDD:227381 116/266 (44%)
C2H2 Zn finger 344..363 CDD:275368 17/18 (94%)
C2H2 Zn finger 371..393 CDD:275368 17/21 (81%)
zf-H2C2_2 385..410 CDD:372612 20/24 (83%)
C2H2 Zn finger 401..421 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006531
OrthoInspector 1 1.000 - - otm49454
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3166
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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