DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and hkb

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster


Alignment Length:342 Identity:87/342 - (25%)
Similarity:128/342 - (37%) Gaps:111/342 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 SQLVSGSGGGYLNG---SSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQ 476
            ::|.|.|.|...:|   |:|:|...|.:||:|.:.:...|         :|.|.|.|..|.|   
  Fly    45 TELASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNH---------SSYTRTSTPLLDA--- 97

  Fly   477 QQQQQQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPG--SPGSSMVAAA 539
                        .|....|.|  .||.:.:.:|::||       |.||:....  |..|.:..||
  Fly    98 ------------APHPVFSHP--QSSPLDTHAAATAS-------LAPPNQHAPFLSAASDLYYAA 141

  Fly   540 AAAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQ 604
            |||||...:||..      |.|....|.|:.|:       .......:.......|:..::|:|:
  Fly   142 AAAAAAAASTPTA------VPGFGMDPFTMGLM-------EQEYARVMAEDAQLKALNSRKQRPK 193

  Fly   605 QQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFV 669
            :.:.|                                                            
  Fly   194 KFKCP------------------------------------------------------------ 198

  Fly   670 GCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFA 734
            .|...::.:..||.|.||||||:|:.|....|...|.|::|||||.|.|||.:|:.|..|.:.|.
  Fly   199 NCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFG 263

  Fly   735 RSDHLALHMKRHLPKNK 751
            |.|||..|||.|:|:.:
  Fly   264 RRDHLKKHMKTHMPQER 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 24/82 (29%)
C2H2 Zn finger 671..688 CDD:275368 5/16 (31%)
C2H2 Zn finger 696..718 CDD:275368 10/21 (48%)
zf-H2C2_2 710..735 CDD:463886 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
hkbNP_524221.1 COG5048 195..>261 CDD:227381 28/125 (22%)
C2H2 Zn finger 197..217 CDD:275368 6/79 (8%)
C2H2 Zn finger 225..247 CDD:275368 10/21 (48%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)

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