DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp6

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_991195.1 Gene:sp6 / 402928 ZFINID:ZDB-GENE-040426-1824 Length:278 Species:Danio rerio


Alignment Length:227 Identity:75/227 - (33%)
Similarity:108/227 - (47%) Gaps:37/227 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 PPYQQGHVMGL----INPPPTLQLLGGAATGSNNSCTTTLTTLT----------PASAIQQQQQQ 602
            ||..:..|.|.    ...|.....|.||..|:....:.::::.|          |.|.:....:.
Zfish    13 PPQDEVSVSGWWDVHTGAPAGWMDLQGAGLGAGPGQSGSMSSYTAEPQMCCLSPPGSGMHFPPEG 77

  Fly   603 PQQQQVPQQQPPPTPRSS-------------GGGR---RGRHSHHQPGTAA-HIASLMSVRTVRY 650
            .:.:.:||.. .|.|::|             ..||   :.|.|...||.|: ...:.:|..::  
Zfish    78 FKMEPLPQDL-LPLPQASASFSSEEQQDAVAAAGRPKPQRRPSSRAPGQASCRCPNCLSAESL-- 139

  Fly   651 NRRNNPELEKRR-IHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRH 714
              .|:.:..||: :|:|...||.|.|.|:||||||.|.|:|::|:.|.|..|..||.|||||.||
Zfish   140 --GNSGDASKRKHLHNCHIPGCGKAYVKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRH 202

  Fly   715 YRKHTGAKPFKCIVCERSFARSDHLALHMKRH 746
            .:.|||||.|.|..|.|.|.|:||||.||:.|
Zfish   203 LQTHTGAKRFGCSSCPRVFLRADHLAKHMRVH 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 38/83 (46%)
C2H2 Zn finger 671..688 CDD:275368 11/16 (69%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:463886 14/24 (58%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
sp6NP_991195.1 SP6-9_N <1..153 CDD:425402 28/144 (19%)
C2H2 Zn finger 157..176 CDD:275368 12/18 (67%)
COG5048 <167..>219 CDD:227381 30/51 (59%)
C2H2 Zn finger 184..206 CDD:275368 12/21 (57%)
C2H2 Zn finger 214..234 CDD:275368 11/19 (58%)

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