DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp5

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_989092.1 Gene:sp5 / 394696 XenbaseID:XB-GENE-1217606 Length:374 Species:Xenopus tropicalis


Alignment Length:345 Identity:107/345 - (31%)
Similarity:132/345 - (38%) Gaps:101/345 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 HPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRH 515
            ||.:...||.:|....|...:|.                        |||.:.::|...||...|
 Frog    70 HPWTNEISAHSSGGIQPHNGIGL------------------------STSKTQLASHIQSSFVTH 110

  Fly   516 MFVPPLTPPSSDPGSP--GSSM-----VAAAAAAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLG 573
            ..  ||||| :||..|  .|.|     ..||.....|....|..||..        |.|....|.
 Frog   111 EL--PLTPP-ADPSYPYDYSPMKMLPPPMAAFQTGCQSPYVPAVPYAP--------PAPITSALH 164

  Fly   574 GAATGSNNSCTTTLTTLTPASAIQQQQQQPQQ------QQVPQ---QQPPPTPRSSGGGRRGRHS 629
            |.....:|..                .|||:|      :.:|.   ||..|...:|    ...|.
 Frog   165 GFVPSHSNLI----------------HQQPRQLSPNPAEDMPWWSIQQATPVAHAS----TIPHP 209

  Fly   630 HH------------------QPGTAAHIASLMSVRTVRYNRR---------NNP-ELEKRRIHHC 666
            ||                  |...||.:.:...:.|.|..||         :.| |..|::.|.|
 Frog   210 HHRFPIQRSLVLGHSDFAQYQTQIAALLQTKSPLATARRCRRCRCPNCQTSSGPDEAGKKKQHIC 274

  Fly   667 DFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCER 731
            ...||.|||.|:||||||.|.|:||:|:.|.|..|...|.|||||.||.|.|||.|.|.|..|.:
 Frog   275 HIPGCGKVYGKTSHLKAHLRWHSGERPFICNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPECGK 339

  Fly   732 SFARSDHLALHMKRHLPKNK 751
            .|.||||||.|:|.|  :||
 Frog   340 RFMRSDHLAKHVKTH--QNK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 42/92 (46%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
zf-H2C2_2 680..707 CDD:290200 14/26 (54%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
sp5NP_989092.1 C2H2 Zn finger 277..296 CDD:275368 13/18 (72%)
zf-C2H2 302..326 CDD:333835 12/23 (52%)
C2H2 Zn finger 304..326 CDD:275368 12/21 (57%)
zf-H2C2_2 318..341 CDD:372612 12/22 (55%)
zf-C2H2 332..354 CDD:333835 12/21 (57%)
C2H2 Zn finger 334..354 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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