DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and SP5

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_011509461.1 Gene:SP5 / 389058 HGNCID:14529 Length:454 Species:Homo sapiens


Alignment Length:456 Identity:130/456 - (28%)
Similarity:165/456 - (36%) Gaps:139/456 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 SSSSPKLATPGDNSGNTSSYQQQYASQLVSGSGGGYLNGSSSNSYGYS-WHSSQSFHTKYQIHPP 453
            |.:||....|   :.:.:.::....|.|...:.|.::..:.:...... |..:.|.......|.|
Human    27 SDASPSHFAP---ASSKAGWRLSAPSSLARSARGPHVQVAQAPKVSLGRWDRTPSASPDLGKHSP 88

  Fly   454 SAAASATASATATPTA-------------QLGAQQQQQQQQQQQLQQ----LCPPAAPS---TPS 498
            .|..:||.|....|.|             .||:..:........:..    ..||..||   ||.
Human    89 LALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQ 153

  Fly   499 TSSSSISSSSASSASRHMFVPPLTPPSSDPGSP---------GSSMVAAAAAA-------AAQRR 547
            .:....|..:|...       ||||| :||..|         .|||.|..|:.       |||..
Human   154 KTHLQPSFGAAHEL-------PLTPP-ADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAA 210

  Fly   548 ----------TTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQ 602
                      ..||||           ||||.:.|      |.|.....|    |..:|.|....
Human   211 LPPGYSNLLPPPPPPP-----------PPPTCRQL------SPNPAPDDL----PWWSIPQAGAG 254

  Fly   603 PQQQQVPQQQPPPTPRSSGGGRRGR-----HSHHQPGTAA------------------------- 637
            |....||           |.|..|.     |:...|.:||                         
Human   255 PGASGVP-----------GSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQS 308

  Fly   638 HIASLMSVR-----TVRYNRR----------NNPELE--KRRIHHCDFVGCSKVYTKSSHLKAHQ 685
            .||:|:..:     |.|..||          ..||.|  |::.|.|...||.|||.|:||||||.
Human   309 QIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHL 373

  Fly   686 RIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHLPKN 750
            |.||||:|:.|.|..|...|.|||||.||.|.|||.|.|.|..|.:.|.||||||.|:|.|  :|
Human   374 RWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTH--QN 436

  Fly   751 K 751
            |
Human   437 K 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 45/99 (45%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
zf-H2C2_2 680..707 CDD:290200 15/26 (58%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
SP5XP_011509461.1 C2H2 Zn finger 357..376 CDD:275368 13/18 (72%)
COG5048 <367..440 CDD:227381 43/73 (59%)
zf-H2C2_2 368..395 CDD:290200 15/26 (58%)
C2H2 Zn finger 384..406 CDD:275368 12/21 (57%)
zf-H2C2_2 398..421 CDD:290200 12/22 (55%)
zf-C2H2 412..434 CDD:278523 12/21 (57%)
C2H2 Zn finger 414..434 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.