DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp4

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_073786720.1 Gene:sp4 / 387291 ZFINID:ZDB-GENE-031202-3 Length:720 Species:Danio rerio


Alignment Length:701 Identity:169/701 - (24%)
Similarity:240/701 - (34%) Gaps:226/701 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QSGESGA-SEAWPHLPAPSYASDVPHAQQQQ---LQPAGSPNSNSNGAYGCAP---LYDGAPYEV 185
            |:|.:.| |||.......:..|:  :|.|||   :|....|||:....|...|   ..||...::
Zfish   116 QAGANAASSEAAAGRKVKAVGSN--NAAQQQFQIIQVQNLPNSSGGIQYQVIPHLQTADGQQIQI 178

  Fly   186 ALGYGGAVVASTGGATSSDKE--YLYETKNKEALYADPLDDPYQR-------------------- 228
            :        .|...|.|...|  .|..|.|.:|:.|.|     ||                    
Zfish   179 S--------PSNPAALSVQPEQIQLISTGNNQAILATP-----QRTGSASIVQNQTIPLQIRPSF 230

  Fly   229 ------------------PVLWDDITTS---IQNIDPENA---LMLSSSGSSNNNG------SSN 263
                              |:....:|.:   |.|:.....   |:.||.||.:|..      :::
Zfish   231 PLQLQTIQGTQAPMVTTLPINLGGVTLALPVINNVAGAGGSVQLLQSSDGSISNGNQLITTVTTS 295

  Fly   264 SSSNTGESATSQLPQVKMEAIDESLLETFSTPLLSPLEIKTEKQQRQQQHQHQQQQQQQQQQQQQ 328
            ::.:|| |:||.......:::..:..:..||..:...|...:.:....|....|...:|..|.||
Zfish   296 TADSTG-SSTSTTTATGSDSVVVTSADGLSTTSMVSAESPKDNEADLTQSNGLQSTSEQAGQIQQ 359

  Fly   329 HQQQHQQQYQQQHYQQHYQQQHLYQHHPSLALPGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSS 393
            .|                     ...||.|.             |:|.|..|||.:|  .|....
Zfish   360 FQ---------------------IVGHPVLQ-------------QIQIQSPQQQVVQ--GSIQIQ 388

  Fly   394 PKLATPGDNSGNTSSYQQQYASQLVSGSGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAAS 458
            |         |.|....||.. ||                        |:|....|:        
Zfish   389 P---------GQTLQPVQQNL-QL------------------------QAFQNPAQV-------- 411

  Fly   459 ATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTP 523
            ...:.|.||:.|:..|..|.|......|....|.|.|....:.:.|:..:...:       |:|.
Zfish   412 LIRTPTLTPSGQISWQTVQVQNAGMPQQLTLAPVASSAGGGTFAQIAPLTLGGS-------PITL 469

  Fly   524 PSSD-PGSPGSSMV--AAAAAAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSN----N 581
            .::. |...|...|  |...||..|             |.|:   |.|:..:.|...|.:    .
Zfish   470 SAAQLPAGSGVQTVNIAGLGAAGVQ-------------VQGV---PLTITGVQGQQQGQDGVKVQ 518

  Fly   582 SCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPP-----------PTPRSSGGGRRGRHSHHQPGT 635
            |...|:|....::|:..:|....|....|:..|           |..|...|             
Zfish   519 SAPVTVTVGNISNAVSPEQMGQVQSPSDQEGQPSKRLRRVACSCPNCRDGEG------------- 570

  Fly   636 AAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPE 700
                             |||.:..|::.|.|...||.|||.|:|||:||.|.||||:|:.|.|..
Zfish   571 -----------------RNNSDPSKKKQHVCHMEGCGKVYGKTSHLRAHLRWHTGERPFVCNWIF 618

  Fly   701 CEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHLPKNK 751
            |..||.|||||.||.|.|||.|.|:|..|.:.|.|||||:.|:|.|  :||
Zfish   619 CGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHIKTH--QNK 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 40/82 (49%)
C2H2 Zn finger 671..688 CDD:275368 11/16 (69%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:463886 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
sp4XP_073786720.1 None

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