DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and CG3065

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster


Alignment Length:221 Identity:69/221 - (31%)
Similarity:97/221 - (43%) Gaps:37/221 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 PGSPGSSMVAAAAAAAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTP 592
            |.:|...|:..         :||..|         :.|||....:.||     |........:..
  Fly     6 PNTPTPQMLTT---------STPIEP---------MKPPPAFPTMSGA-----NIHEQASDMILR 47

  Fly   593 ASAIQQ--QQQQPQQQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNN 655
            ||.|.:  :..:...:.||.......|...        ||:.....:.|..:.||:.:.....::
  Fly    48 ASTIFEDVKHDEANVENVPHHGVETEPEDD--------SHYGGNGNSKIRIMPSVKLMATTLASD 104

  Fly   656 PELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTG 720
            |    :|...|.:..|:|.|.|||||::|...|||.||:.|..|:|...|.|||||.||.|.|||
  Fly   105 P----KRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTG 165

  Fly   721 AKPFKCIVCERSFARSDHLALHMKRH 746
            .|||:||.|.:.|:|||||..|:..|
  Fly   166 EKPFECIQCTKKFSRSDHLTKHLATH 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 35/82 (43%)
C2H2 Zn finger 671..688 CDD:275368 9/16 (56%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:463886 15/24 (63%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 46/97 (47%)
C2H2 Zn finger 111..133 CDD:275368 10/21 (48%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 10/19 (53%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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