DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and CG42741

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster


Alignment Length:457 Identity:136/457 - (29%)
Similarity:176/457 - (38%) Gaps:185/457 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 GLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLAT-----------PGDNSGNTSS------- 408
            |.|..|:.|:|.|:.......|    .|||||.|.::           ||.:||::||       
  Fly    19 GPPVQVEPVDLSLRSPRASTSH----GSSSSSYKFSSANKAVGYSNGKPGGSSGSSSSSGFGAGS 79

  Fly   409 -------------YQQQYAS---------------------QLVSGSGGG--------------- 424
                         .||.|||                     :.:||||.|               
  Fly    80 AGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFAASPFFFTYRRISGSGSGNGTGSVSVKQEDNNN 144

  Fly   425 ---YLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQ 486
               |.|||||...|.:.:|.|.:.:|:.:          .|....|....|...|..::..    
  Fly   145 SCSYNNGSSSGGAGSAANSMQDYESKFSL----------LSLFKNPYKFAGGDGQASRKTS---- 195

  Fly   487 QLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRTTPP 551
               |....|.|..|:||.|..|.:.:                |||.:::                
  Fly   196 ---PTGGSSKPLASNSSPSWKSYAGS----------------GSPHAAL---------------- 225

  Fly   552 PPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPPPT 616
                          .|....:|..||..:||..:.:                             
  Fly   226 --------------NPAFGGMGRGATRKDNSSFSGI----------------------------- 247

  Fly   617 PRSSGGGRRGRHSHHQPGTA-AHIASLMSVRTVRYNRRNNPELEK-RRIHHCDFVGCSKVYTKSS 679
              :.|||          |:| ....|..|:....||     :|.| |::|.||..||.|||||||
  Fly   248 --NFGGG----------GSAFGFTTSSDSMANGGYN-----DLSKNRKVHKCDTEGCDKVYTKSS 295

  Fly   680 HLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMK 744
            |||||:|.|||||||.|.|..|.||||||||||||||||||.|||:|.:|.|||:|||||:|||:
  Fly   296 HLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMR 360

  Fly   745 RH 746
            ||
  Fly   361 RH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 54/83 (65%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
zf-H2C2_2 680..707 CDD:290200 19/26 (73%)
C2H2 Zn finger 696..718 CDD:275368 17/21 (81%)
zf-H2C2_2 710..735 CDD:290200 19/24 (79%)
C2H2 Zn finger 726..746 CDD:275368 13/19 (68%)
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 57/78 (73%)
zf-C2H2 280..304 CDD:278523 18/23 (78%)
C2H2 Zn finger 282..304 CDD:275368 17/21 (81%)
zf-H2C2_2 296..>313 CDD:290200 13/16 (81%)
C2H2 Zn finger 312..334 CDD:275368 17/21 (81%)
zf-H2C2_2 326..351 CDD:290200 19/24 (79%)
C2H2 Zn finger 342..362 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455416
Domainoid 1 1.000 40 1.000 Domainoid score I3723
eggNOG 1 0.900 - - E33208_3BRQ6
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1623
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D416605at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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