DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp5a

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_851304.2 Gene:sp5a / 353154 ZFINID:ZDB-GENE-030430-2 Length:368 Species:Danio rerio


Alignment Length:355 Identity:113/355 - (31%)
Similarity:144/355 - (40%) Gaps:90/355 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 HPPSAAASATASAT-----ATPT--------AQLGAQQQ------QQQQQQQQLQQLCPPAAPST 496
            |.|.|..:||.:..     :|||        ..||:..:      .:...|..|.        |.
Zfish    30 HSPLALLAATCNRIGHHHGSTPTDFIQVPYDTTLGSPSRIFHPWSNEANHQSTLS--------SN 86

  Fly   497 PSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSP-GSSMVAAAAAAAAQRRTTPPPPYQQGHVM 560
            ||...||.|...:|.||.|..  ||||| :||..| ..|.|.....:....::|.||.|......
Zfish    87 PSFGLSSKSHLQSSYASHHEL--PLTPP-ADPTYPYDFSPVKMLPCSMQSLQSTCPPTYVPAVTY 148

  Fly   561 GLINP-PPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQ--PQQ-QQVP---QQQPPPTPR 618
            ....| ||.:.......:|                .:.|||:|  |.. :.:|   .||..|...
Zfish   149 AAPAPIPPAMPSFVPGHSG----------------LVHQQQRQLSPNPGEDIPWWSLQQGNPVAH 197

  Fly   619 SSGGGRRGRHSHHQP---GTA----------AHIASLMSVR----TVRYNRR----------NNP 656
            |.       |.|..|   |..          ..||:|:..:    |.|..||          ::.
Zfish   198 SV-------HPHRFPIQRGLVLGHTDFAQYQTQIAALLHTKSPLATARRCRRCRCPNCQSSSSSD 255

  Fly   657 ELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGA 721
            |..|::.|.|...||.|||.|:||||||.|.|:||:|:.|.|..|...|.|||||.||.|.|||.
Zfish   256 EPGKKKQHICHIPGCGKVYGKTSHLKAHLRWHSGERPFVCNWLFCGKSFTRSDELQRHLRTHTGE 320

  Fly   722 KPFKCIVCERSFARSDHLALHMKRHLPKNK 751
            |.|.|..|.:.|.||||||.|:|.|  :||
Zfish   321 KRFVCPDCCKRFMRSDHLAKHVKTH--QNK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 42/96 (44%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
zf-H2C2_2 680..707 CDD:290200 14/26 (54%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
sp5aNP_851304.2 C2H2 Zn finger 268..287 CDD:275368 13/18 (72%)
zf-H2C2_2 279..306 CDD:290200 14/26 (54%)
C2H2 Zn finger 295..317 CDD:275368 12/21 (57%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
C2H2 Zn finger 325..345 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I4393
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.990

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