DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp1

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_997827.2 Gene:sp1 / 324109 ZFINID:ZDB-GENE-030131-2829 Length:594 Species:Danio rerio


Alignment Length:597 Identity:151/597 - (25%)
Similarity:201/597 - (33%) Gaps:169/597 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 DPENALMLSSSGSSNNNGSSNSSSNTGESATSQLPQVKMEAIDE-----------SLLET----- 291
            ||:.:.|..|........||:|:.::.:.:...|.......|||           |.||.     
Zfish    18 DPQKSSMADSEPGFPQKSSSSSAQDSQQPSPLALLAATCSRIDENGAAEPQTRQDSQLELPQGTN 82

  Fly   292 --------FSTPLLSPLEIKT---EKQQRQQQHQHQQQQQQQQQQQQQHQQQHQQQYQQQHYQQH 345
                    ..||..:|..:.|   |::.|......|.|.....|.||.                 
Zfish    83 GWHISPAGTQTPTSAPAAVPTAPSEERSRAATATIQPQFLMPAQSQQL----------------- 130

  Fly   346 YQQQHLYQHHPSLALPGLPPAVDV-VELQLQQQHQQQQHLQHNNSSSSSPKLATPGD------NS 403
                       ..||||:.|.:.. |..|.|....||..||.....|....:::||.      .|
Zfish   131 -----------LTALPGVMPNIQYQVIPQFQTVDGQQLQLQAAQDMSGQLLVSSPGGQQLRAAGS 184

  Fly   404 GNTSS----YQQQYASQLVSG----------------------SGGGYLNGSSSNSYGYSWHSSQ 442
            ||..:    :||....|.:|.                      .|.|.:.|.:            
Zfish   185 GNILTVPGLFQQAIPLQNLSAVLPNQTQFLANVPLNANITLLPVGPGPVGGDT------------ 237

  Fly   443 SFHTKYQIHPPSAAASATASATATPTAQLG----------AQQQQQQQQQQQLQQLCPPAAPSTP 497
              ||.....|......:|||:|.. ||.:|          |....|:.|.|.|.|.....|.|.|
Zfish   238 --HTAVAAPPQGPEFCSTASSTRA-TAAVGIATLAQSRAPAASDGQKGQPQMLLQGVQQGAVSAP 299

  Fly   498 STSSSSISSSSASSASRHMFVPPLTPPS-SDPGSPGSSMVAAAAAAAAQRRTTPPPPYQQGHVMG 561
            .                    |..|..: |..|.....:...|:.:....||...........:.
Zfish   300 G--------------------PVFTTQTLSQDGVQNVQIQTIASGSPILIRTLGADGQVSWQTLQ 344

  Fly   562 LINPPPTLQLLGGAATGSNNSC------TTTLTTLTPASAIQQQQQQPQQQQVPQQQPPPTPRSS 620
            |.:|...:.|   |.||::...      |..|.||.....    |.||.|.       |.|..|:
Zfish   345 LQSPGAQITL---APTGASGPVQLSGLQTINLNTLGSGGL----QMQPIQM-------PVTIASA 395

  Fly   621 GGGRRG----------RHSHHQPGTAAHIASLMSVRTVRY---NRRNNPELEKRRIHHCDFVGCS 672
            .|....          .::...|.||:...:.....|..|   ....:|  .|::.|.|...||.
Zfish   396 PGEAAADALEDSAVLEENAESSPNTASSRRTRREACTCPYCKDGEGRDP--SKKKQHICHIPGCG 458

  Fly   673 KVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSD 737
            |||.|:|||:||.|.||||:|:.|.|..|..||.|||||.||.|.|||.|.|.|..|.:.|.|||
Zfish   459 KVYGKTSHLRAHLRWHTGERPFVCSWSFCGKRFTRSDELQRHKRTHTGEKKFSCTECPKRFMRSD 523

  Fly   738 HLALHMKRHLPK 749
            ||:.|:|.||.|
Zfish   524 HLSKHIKTHLNK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 40/85 (47%)
C2H2 Zn finger 671..688 CDD:275368 11/16 (69%)
zf-H2C2_2 680..707 CDD:290200 15/26 (58%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
sp1NP_997827.2 C2H2 Zn finger 452..474 CDD:275368 13/21 (62%)
COG5048 <465..547 CDD:227381 42/71 (59%)
zf-H2C2_2 466..493 CDD:290200 15/26 (58%)
C2H2 Zn finger 482..504 CDD:275368 13/21 (62%)
zf-H2C2_2 496..519 CDD:290200 12/22 (55%)
zf-C2H2 510..532 CDD:278523 11/21 (52%)
C2H2 Zn finger 512..532 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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