DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp3b

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_005165855.1 Gene:sp3b / 322961 ZFINID:ZDB-GENE-110815-3 Length:783 Species:Danio rerio


Alignment Length:684 Identity:160/684 - (23%)
Similarity:222/684 - (32%) Gaps:206/684 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 DDITTSIQNIDPENALM---LSSSGSSNNNGSSNSSSNTGESATSQLPQVKMEAIDESLLETFST 294
            ||...:|  :||:  :|   .||..:|...|......||.:......|.:|              
Zfish    79 DDAVPTI--LDPK--VMQPQRSSHKTSREMGCQTEELNTQDGQCQTFPDLK-------------- 125

  Fly   295 PLLSPLEIKTEKQQRQQQHQHQQQQ--------QQQQQQQQQHQQQHQQQYQQQHYQQHYQQQHL 351
                |..:|.|.:....:...:||:        .|....|.....|.||.......|........
Zfish   126 ----PHTLKLEPRSETPEQPAKQQEMAALDVDSSQSDFLQPASGAQDQQTTDLTAIQMTGSSDRW 186

  Fly   352 YQHHPSLALPGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQQQYASQ 416
            ....|..::.|.|..|.|....|...:.|........:..:.|...|.|.:....:..|.|...|
Zfish   187 EVLTPVSSVKGEPAVVHVPSGGLLGSNGQYVVPLQTMAGQTQPVFVTAGVDGTGANGVQYQVIPQ 251

  Fly   417 LVSGSGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATAS--------------ATATP 467
            |....|       :|.||..|.....:..|...|.|......|||:              ....|
Zfish   252 LQGADG-------ASLSYTASAADGSTLGTDIAILPDGTQGIATATNANDLQGLLSQSGHVQQIP 309

  Fly   468 TAQL-----GAQQQQ---------------QQQQQQQLQQLCPPAAPST--------------PS 498
            |..|     |.|.|.               .......|:.|....|.:.              |:
Zfish   310 TVSLAGSGFGTQGQVVANMGLPGNITLVPINSLSNVDLESLGLAGAQTIATSVTADGQLIMTGPT 374

  Fly   499 TSSSS--------ISSSSASSASRHMFVPPLTPPSSD--PGS-PGSSMVAAAAAAAAQRRTTPPP 552
            |::|.        ..|.:|:.|:.:.|||..|..:|.  |.: .|:.::..|.|.:|..:..   
Zfish   375 TTTSDNQGESGKCTESLNANDANANAFVPTTTSSTSTSLPETIDGTGVLTQATAVSAGHQDL--- 436

  Fly   553 PY-QQGHVMGLINPPPTLQLL------GGAATGSN----NSCTTTL--TTLTPASAIQQQQQQPQ 604
            .| ||.|..|   ....:|||      |.|.|..:    |:.|..:  .|::|...||.|..|.|
Zfish   437 SYIQQNHTTG---GEQVVQLLPAQTADGAAQTLQSVQLLNAGTFLIQAQTVSPTGQIQWQTFQVQ 498

  Fly   605 QQQVPQQQPPPTPRSSGGGRRGRH---------SHHQPGTAAHIASLMSVRTVRYNR-------- 652
            ..|..|....|    :.||.....         |..|.||...:..:.:::||..|.        
Zfish   499 GVQNLQNLQLP----AAGGVSSPQITLAPVQTLSLGQSGTTGALGQIPNLQTVTVNSVGQYQQDE 559

  Fly   653 ----------RNNPE-------------------------------------------------- 657
                      :..||                                                  
Zfish   560 NTESHTDIQIKEEPESDDWPNSTLSTSDLAHLRVRLVEEDMEGTGQEGKRLRRVACTCPNCKEAG 624

  Fly   658 -----LEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRK 717
                 :.|::.|.|...||.|||.|:|||:||.|.|:||:|:.|.|..|..||.|||||.||.|.
Zfish   625 GRGSSMGKKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFICSWSYCGKRFTRSDELQRHRRT 689

  Fly   718 HTGAKPFKCIVCERSFARSDHLALHMKRHLPKNK 751
            |||.|.|.|..|.:.|.||||||.|:|.|  :||
Zfish   690 HTGEKKFVCPECSKRFMRSDHLAKHIKTH--QNK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 41/155 (26%)
C2H2 Zn finger 671..688 CDD:275368 11/16 (69%)
zf-H2C2_2 680..707 CDD:290200 14/26 (54%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
sp3bXP_005165855.1 THAP 8..85 CDD:283206 2/5 (40%)
C2H2 Zn finger 638..660 CDD:275368 13/21 (62%)
COG5048 <651..728 CDD:227381 42/73 (58%)
zf-C2H2 666..690 CDD:278523 13/23 (57%)
C2H2 Zn finger 668..690 CDD:275368 13/21 (62%)
zf-H2C2_2 682..705 CDD:290200 12/22 (55%)
zf-C2H2 696..718 CDD:278523 12/21 (57%)
C2H2 Zn finger 698..718 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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