DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and klf1

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_571011.1 Gene:klf1 / 30104 ZFINID:ZDB-GENE-980526-55 Length:365 Species:Danio rerio


Alignment Length:482 Identity:131/482 - (27%)
Similarity:180/482 - (37%) Gaps:135/482 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 AIDESLLETFSTPLLSPLEIKTEK----QQRQQQHQHQQQQQQQQQQQQQHQQQHQQQYQQQHYQ 343
            |:.:::|.:||....:...:|.||    ...:..||.....:..|....:||...:..:..:...
Zfish     2 AVTQAVLPSFSNFCTNSENMKFEKGFLDLDSKDLHQSPASYKPSQFLTDEHQDDSEGCWDMEFLL 66

  Fly   344 QHYQQQHLYQHHPSLALPGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSS 408
            ..:              ..:.|                   :.:||.:.:|:..|..|...:...
Zfish    67 SDW--------------ASMSP-------------------ERSNSQNYTPQRPTLQDQLHSPDL 98

  Fly   409 YQQQYASQLVSGSGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGA 473
            ||:              ||....|.:.....||.:     ::.||    .||.|::..|..|...
Zfish    99 YQE--------------LNAPKPNRHQVCVASSLA-----ELLPP----EATLSSSLPPDLQFNC 140

  Fly   474 QQQQQQQQQQQLQQLCPPAAPSTPSTSS----SSISSSSASSASRHMFVP-PLT--PPSSDPGSP 531
            ....||..:...|...|....:.|.||:    ||:.....|....|.:.| ||.  |.|....:.
Zfish   141 GFLDQQAAKSYSQAENPQQFSAFPVTSNVNRDSSMGKMGKSWDFGHYYQPAPLISFPDSKFVQTQ 205

  Fly   532 GSSMVAAAAAAAAQRRTTP----PPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTP 592
            |.:|..............|    |..||| ....:..|||                         
Zfish   206 GITMETVVFPPHHHYNFIPSYSHPRLYQQ-QANYVHRPPP------------------------- 244

  Fly   593 ASAIQQQQQQPQQQQVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPE 657
                 |......|..||....||....|...|||                               
Zfish   245 -----QSHFPSTQSMVPDSTVPPAGLESKRIRRG------------------------------- 273

  Fly   658 LEKRR--IHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTG 720
            |.||:  :|.|::.||.|.||||||||||.|.|||||||.|.|..|.|:||||||||||:|||||
Zfish   274 LVKRKATVHSCEYPGCQKTYTKSSHLKAHLRTHTGEKPYHCTWDGCGWKFARSDELTRHFRKHTG 338

  Fly   721 AKPFKCIVCERSFARSDHLALHMKRHL 747
            .||::|::|.|:|:||||||||||||:
Zfish   339 QKPYECLLCHRAFSRSDHLALHMKRHV 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 46/84 (55%)
C2H2 Zn finger 671..688 CDD:275368 13/16 (81%)
zf-H2C2_2 680..707 CDD:290200 18/26 (69%)
C2H2 Zn finger 696..718 CDD:275368 15/21 (71%)
zf-H2C2_2 710..735 CDD:290200 16/24 (67%)
C2H2 Zn finger 726..746 CDD:275368 14/19 (74%)
klf1NP_571011.1 COG5048 287..>344 CDD:227381 42/56 (75%)
C2H2 Zn finger 287..306 CDD:275368 14/18 (78%)
zf-H2C2_2 298..>315 CDD:290200 13/16 (81%)
C2H2 Zn finger 314..336 CDD:275368 15/21 (71%)
zf-H2C2_2 328..353 CDD:290200 16/24 (67%)
C2H2 Zn finger 344..364 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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