DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and Sp7

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_852039.2 Gene:Sp7 / 300260 RGDID:631377 Length:428 Species:Rattus norvegicus


Alignment Length:426 Identity:115/426 - (26%)
Similarity:151/426 - (35%) Gaps:121/426 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 LQHNNSSSSSP--KLATPGDNSGNTSSYQQQYASQLVSGSGG---GYLNGSSSNSYGYSWHSSQS 443
            |:......|||  .|.......|.:|..:...|    .|.||   .|.:.|:..:.|.::.:  .
  Rat     6 LEEEAHYGSSPLAMLTAACSKFGGSSPLRDSTA----LGKGGTKKPYTDLSAPKTMGDAYPA--P 64

  Fly   444 FHTKYQIHPPSAAASATASATAT-----------PTAQLGAQQQQQQQQQQQLQQLCPPAAPSTP 497
            |.:...:..|:.:..|.||..|.           ||   |||.......:......|   .||..
  Rat    65 FSSTNGLLSPAGSPPAPASGYANDYPPFPHSFPGPT---GAQDPGLLVPKGHSSSDC---LPSVY 123

  Fly   498 STSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRTTPPPPYQQGHVMGL 562
            ::...|....|...|..|..:.|         .||::                |.|:...|    
  Rat   124 TSLDMSHPYGSWYKAGIHAGISP---------GPGNT----------------PTPWWDMH---- 159

  Fly   563 INPPPTLQLLGGAATGSNNSCTTTLTT--------------------LTPASAIQQQQQQPQQQQ 607
                |....||| ..|..:....||:|                    |.||........||..|.
  Rat   160 ----PGGNWLGG-GQGQGDGLQGTLSTGPAQPPLNPQLPTYPSDFAPLNPAPYPAPHLLQPGPQH 219

  Fly   608 V-PQQQPPP----------------TPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNN 655
            | ||....|                .||.:|.|..|.::....|.:.            .:..|.
  Rat   220 VLPQDVYKPKAVGNSGQLEGSGAGKPPRGAGTGGSGGYAGSGAGRST------------CDCPNC 272

  Fly   656 PELE----------KRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDE 710
            .|||          |:.||.|...||.|||.|:||||||.|.||||:|:.|.|..|..||.||||
  Rat   273 QELERLGAAAAGLRKKPIHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDE 337

  Fly   711 LTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRH 746
            |.||.|.||..|.|.|::|.:.|.|||||:.|.:.|
  Rat   338 LERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQRTH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 42/92 (46%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:463886 12/24 (50%)
C2H2 Zn finger 726..746 CDD:275368 9/19 (47%)
Sp7NP_852039.2 SP6-9_N 2..292 CDD:425402 68/343 (20%)
C2H2 Zn finger 296..315 CDD:275368 13/18 (72%)
zf-H2C2_2 307..334 CDD:463886 16/26 (62%)
C2H2 Zn finger 323..345 CDD:275368 13/21 (62%)
zf-H2C2_2 337..362 CDD:463886 12/24 (50%)
C2H2 Zn finger 353..373 CDD:275368 9/19 (47%)

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