DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and Klf17

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_038967113.1 Gene:Klf17 / 298449 RGDID:1307711 Length:383 Species:Rattus norvegicus


Alignment Length:400 Identity:109/400 - (27%)
Similarity:153/400 - (38%) Gaps:87/400 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 QQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQ---QQYASQLVSGSGGGYLNGSSSNSYGY 436
            |...||..|....::....|....|| :|||:..:|   .||..:|:.    .|:  :|:..:..
  Rat     3 QDNEQQAMHQSPMDNEMLMPVSHMPG-SSGNSGFHQPPAPQYLPELMR----PYM--ASAEEFRC 60

  Fly   437 SWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPST----- 496
               |...:..::....|.:.|...:....||:      |...|:...:...:.|...|.|     
  Rat    61 ---SEGGWEPQFIRSLPESGARCPSQLIPTPS------QNYCQRSIGRGSHVMPVGNPGTLGVAI 116

  Fly   497 ------------PSTSSSSISSSSASSASRHMF-VPPLTPPSSDPGSPGSSMVAAAAAAAAQRRT 548
                        .|.:|..:|..:.|:|....: |.|..|.::....||..:|....:|.....|
  Rat   117 SFSENLMSQGGLSSPASCGVSVMTHSNAPTMPYSVSPTVPATTGSLKPGIFLVPGMPSAETHAVT 181

  Fly   549 TPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVP--QQ 611
                || ...::..:||               ...:.....|.|..:......|...|:.|  .:
  Rat   182 ----PY-MNQMLHSVNP---------------EMVSARFQQLLPIDSQDSLATQSNVQEGPFMCE 226

  Fly   612 QPPPTP--RSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKV 674
            ||.|.|  |.:....||.                       .||.:..|   |.:.|.:..|.|.
  Rat   227 QPTPAPQERETASTSRGA-----------------------TRRRSLVL---RPYVCSYDDCGKA 265

  Fly   675 YTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHL 739
            |||.|||.:|.|.|||||||.|.|..|:|||.|||||.||.|.||..:|.||..|.|.|.|||||
  Rat   266 YTKRSHLVSHLRKHTGEKPYICDWKGCKWRFFRSDELGRHKRIHTRYRPHKCDECNREFMRSDHL 330

  Fly   740 ALHMKRHLPK 749
            ..|.:.||||
  Rat   331 RQHKRTHLPK 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 38/82 (46%)
C2H2 Zn finger 671..688 CDD:275368 10/16 (63%)
zf-H2C2_2 680..707 CDD:290200 17/26 (65%)
C2H2 Zn finger 696..718 CDD:275368 14/21 (67%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
Klf17XP_038967113.1 KLF17_N 1..259 CDD:410567 60/317 (19%)
zf-C2H2 255..279 CDD:395048 11/23 (48%)
C2H2 Zn finger 260..279 CDD:275368 10/18 (56%)
C2H2 Zn finger 287..309 CDD:275368 14/21 (67%)
zf-H2C2_2 304..324 CDD:404364 10/19 (53%)
zf-C2H2 315..337 CDD:395048 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344878
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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