DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and Klf17

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001418087.1 Gene:Klf17 / 298449 RGDID:1307711 Length:383 Species:Rattus norvegicus


Alignment Length:400 Identity:109/400 - (27%)
Similarity:153/400 - (38%) Gaps:87/400 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 QQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQ---QQYASQLVSGSGGGYLNGSSSNSYGY 436
            |...||..|....::....|....|| :|||:..:|   .||..:|:.    .|:  :|:..:..
  Rat     3 QDNEQQAMHQSPMDNEMLMPVSHMPG-SSGNSGFHQPPAPQYLPELMR----PYM--ASAEEFRC 60

  Fly   437 SWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPST----- 496
               |...:..::....|.:.|...:....||:      |...|:...:...:.|...|.|     
  Rat    61 ---SEGGWEPQFIRSLPESGARCPSQLIPTPS------QNYCQRSIGRGSHVMPVGNPGTLGVAI 116

  Fly   497 ------------PSTSSSSISSSSASSASRHMF-VPPLTPPSSDPGSPGSSMVAAAAAAAAQRRT 548
                        .|.:|..:|..:.|:|....: |.|..|.::....||..:|....:|.....|
  Rat   117 SFSENLMSQGGLSSPASCGVSVMTHSNAPTMPYSVSPTVPATTGSLKPGIFLVPGMPSAETHAVT 181

  Fly   549 TPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVP--QQ 611
                || ...::..:||               ...:.....|.|..:......|...|:.|  .:
  Rat   182 ----PY-MNQMLHSVNP---------------EMVSARFQQLLPIDSQDSLATQSNVQEGPFMCE 226

  Fly   612 QPPPTP--RSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKV 674
            ||.|.|  |.:....||.                       .||.:..|   |.:.|.:..|.|.
  Rat   227 QPTPAPQERETASTSRGA-----------------------TRRRSLVL---RPYVCSYDDCGKA 265

  Fly   675 YTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHL 739
            |||.|||.:|.|.|||||||.|.|..|:|||.|||||.||.|.||..:|.||..|.|.|.|||||
  Rat   266 YTKRSHLVSHLRKHTGEKPYICDWKGCKWRFFRSDELGRHKRIHTRYRPHKCDECNREFMRSDHL 330

  Fly   740 ALHMKRHLPK 749
            ..|.:.||||
  Rat   331 RQHKRTHLPK 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 38/82 (46%)
C2H2 Zn finger 671..688 CDD:275368 10/16 (63%)
C2H2 Zn finger 696..718 CDD:275368 14/21 (67%)
zf-H2C2_2 710..735 CDD:463886 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)
Klf17NP_001418087.1 KLF17_N 1..259 CDD:410567 60/317 (19%)
zf-C2H2 255..279 CDD:395048 11/23 (48%)
C2H2 Zn finger 260..279 CDD:275368 10/18 (56%)
C2H2 Zn finger 287..309 CDD:275368 14/21 (67%)
zf-H2C2_2 304..324 CDD:463886 10/19 (53%)
zf-C2H2 315..337 CDD:395048 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 10/19 (53%)

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