DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and hsr1

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_593553.1 Gene:hsr1 / 2543251 PomBaseID:SPAC3H1.11 Length:582 Species:Schizosaccharomyces pombe


Alignment Length:455 Identity:98/455 - (21%)
Similarity:160/455 - (35%) Gaps:105/455 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 HLYQHHPSLAL----PGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSY- 409
            |...|:.|:|.    ...||.|..:...|...........||.:..:.|..:.    .|.||.| 
pombe    48 HPSTHNSSVAYVDSQDNKPPLVSTLHFSLAPSLSPSSAQSHNTALITEPLTSF----IGGTSQYP 108

  Fly   410 -----QQQYASQLVSGSGGGYLNGSS-----SNSYGYSWHSSQSFHTKYQI---HPPSAAASATA 461
                 ..|:.||:.  :.|..||.::     :|:.|:.........:|.:|   |.||.....|.
pombe   109 SASFSTSQHPSQVY--NDGSTLNSNNTTQQLNNNNGFQPPPQNPGISKSRIAQYHQPSQTYDDTV 171

  Fly   462 SATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFVPPL----- 521
            .::.....:.|||           ..|.||.:..|.::.....|:::|..|:.   :|..     
pombe   172 DSSFYDWYKAGAQ-----------HNLAPPQSSHTEASQGYMYSTNTAHDATD---IPSSFNFYN 222

  Fly   522 TPPSSDPGSP----------------GSSMVAAAAAAAAQR--RTTPPPPYQQGH---------- 558
            |..|:.|...                .::::.|......:.  .|.|..|:||..          
pombe   223 TQASTAPNPQEINYQWSHEYRPHTQYQNNLLRAQPNVNCENFPTTVPNYPFQQPSYNPNALVPSY 287

  Fly   559 --VMGLINPPPTLQLLGG-----AATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPPPT 616
              ::..:.|.|.|.:..|     ::..||.||.:..::.....|.|:.........:|......|
pombe   288 TTLVSQLPPSPCLTVSSGPLSTASSIPSNCSCPSVKSSGPSYHAEQEVNVNSYNGGIPSTSYNDT 352

  Fly   617 PRSSGGG----------------RRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHH 665
            |:.|..|                ..||..:....| ..|.::.:..:::..:|..|...|..:..
pombe   353 PQQSVTGSYNSGETMSTYLNQTNTSGRSPNSMEAT-EQIGTIGTDGSMKRRKRRQPSNRKTSVPR 416

  Fly   666 C----DFV--GCSKVYTKSSHLKAHQR-IHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKP 723
            .    .||  .|||.:.:|.||:.|.| :||.|||:.|   .|..||:|.|.|.:|.|.|..|.|
pombe   417 SPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC---ICGKRFSRRDNLRQHERLHVNASP 478

  Fly   724  723
            pombe   479  478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 30/90 (33%)
C2H2 Zn finger 671..688 CDD:275368 8/17 (47%)
zf-H2C2_2 680..707 CDD:290200 13/27 (48%)
C2H2 Zn finger 696..718 CDD:275368 9/21 (43%)
zf-H2C2_2 710..735 CDD:290200 6/14 (43%)
C2H2 Zn finger 726..746 CDD:275368
hsr1NP_593553.1 COG5048 103..582 CDD:227381 86/396 (22%)
zf-C2H2 423..444 CDD:278523 9/20 (45%)
C2H2 Zn finger 425..446 CDD:275368 8/20 (40%)
zf-H2C2_2 437..462 CDD:290200 13/27 (48%)
C2H2 Zn finger 454..473 CDD:275368 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1951
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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