DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and Zfp352

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_694742.2 Gene:Zfp352 / 236537 MGIID:2387418 Length:551 Species:Mus musculus


Alignment Length:668 Identity:129/668 - (19%)
Similarity:216/668 - (32%) Gaps:184/668 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 SGASEAWPHLPAPSYASDVPHAQQQQLQPAGSPNSNSNGAYGCAPLYDGAPYEVALGYGGAVV-- 194
            :|||:     |.|.           ..||  ||..:|.       |:.|...|: |.:...|:  
Mouse     7 TGASQ-----PGPC-----------NTQP--SPVESSQ-------LFSGQSSEM-LTWKQTVMES 45

  Fly   195 --ASTGGATSSDKEYLYETKNKEALYADPLDDPYQRPVLWD-DITTSIQNIDPENALMLSSSGSS 256
              .||...|.:.....|..|.....:..|.::     ..|: .:.::.|.|.|.           
Mouse    46 ASCSTQETTCTQNSTAYPGKAIGFHFGQPFEN-----TSWNQQVVSAEQKISPA----------- 94

  Fly   257 NNNGSSNSSSNTGESATSQLPQVKMEAIDESLLETFSTPLLSPLEIKTEKQQRQQQHQHQQQQQQ 321
               |..::..|:.....  ||..|...:|..  |||..   ....::|....:....|:....:.
Mouse    95 ---GLYHTQLNSAPQIC--LPPQKTTRVDTR--ETFYN---EDYWMRTLNSDKTLLTQNTAMCEN 149

  Fly   322 QQQQQQQHQ----QQHQQQ-------YQQQH----YQQHYQQQ---HLYQHHPSLALPG----LP 364
            |:.....||    ..|..|       :..:|    |..|...:   ||..:...:..|.    |.
Mouse   150 QRVTFDNHQIALYGSHAGQDPNVGHAFASEHDWTSYNSHMTTRNGGHLTLYESQMTAPSCSQTLH 214

  Fly   365 PAVDVVELQLQQQHQ-QQQHLQHNNSSSSSPKLATPG----------DNSGNTSSYQQQYASQLV 418
            |...:.....|...: ||.:|..||....:..:...|          .|...|:...:.::.|.|
Mouse   215 PNQIITSFSEQNYFEDQQSNLAVNNGFYGNQVILPNGYQAFYEPQMRANFDQTNDQMKSFSGQNV 279

  Fly   419 SGSGGGYLNGSSSNSYGY---SWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQ 480
            .......|:|..|.| ||   .:...|......|:..|......:...|.|.:........::.:
Mouse   280 CKGQENLLSGECSLS-GYQTSGYRCDQDLIVNPQVTSPIGGQPLSDFQTQTSSFDTALPGSKRTR 343

  Fly   481 QQQQLQQLCPPAAPSTPSTSSSSISSSSASSASRHMFV----PPLTPPSSDPGSPGSSMVAAAAA 541
            ...:....||  ..::|::..:.......:|..::.:.    .|....|.||.....|:.|....
Mouse   344 PSAEDNLACP--LETSPTSEETLYLGQMRTSVDQNFYSSQNGTPNIKESLDPQVTSFSLQAPYVG 406

  Fly   542 AAAQRRTTPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQ 606
            .::....:|           ||...|           ..||..::|.          |:|.|:.:
Mouse   407 ESSYPSCSP-----------LIQKQP-----------QKNSSASSLV----------QRQHPEMK 439

  Fly   607 -----QVPQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHC 666
                 |.|..|..|:|                                           .:::.|
Mouse   440 LDFKTQSPVSQKDPSP-------------------------------------------LKLYFC 461

  Fly   667 DFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCER 731
            .:.||:|.|.::.|||.||:.||.::.|.|..|.|.|.|.|..:|.||..||.|.:.:.|.:|..
Mouse   462 TYKGCTKFYKRAYHLKEHQKKHTDKRKYGCDEPGCTWSFFRLCDLNRHKEKHNGERFYACPLCST 526

  Fly   732 SFARSDHLALHMKRHLPK 749
            :::|    .|::|:||.|
Mouse   527 NYSR----LLYLKKHLEK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 25/82 (30%)
C2H2 Zn finger 671..688 CDD:275368 8/16 (50%)
zf-H2C2_2 680..707 CDD:290200 13/26 (50%)
C2H2 Zn finger 696..718 CDD:275368 9/21 (43%)
zf-H2C2_2 710..735 CDD:290200 8/24 (33%)
C2H2 Zn finger 726..746 CDD:275368 5/19 (26%)
Zfp352NP_694742.2 C2H2 Zn finger 464..483 CDD:275368 9/18 (50%)
C2H2 Zn finger 491..513 CDD:275368 9/21 (43%)
C2H2 Zn finger 521..538 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841532
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.