DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sptf-2

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_495833.1 Gene:sptf-2 / 188733 WormBaseID:WBGene00011926 Length:166 Species:Caenorhabditis elegans


Alignment Length:135 Identity:49/135 - (36%)
Similarity:67/135 - (49%) Gaps:5/135 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   609 PQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSK 673
            |...|..|..||.....|.:............:..:.:.:::..|.:     :..|.|...||.|
 Worm    27 PPDSPASTSASSSSSSIGANELTTKRRKCERCTCPNCKAIKHGDRGS-----QHTHLCSVPGCGK 86

  Fly   674 VYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDH 738
            .|.|:|||:||.|.|||::|:.|.|.:|..||.|||:|.||.|.||....|.|..|.|.|:||||
 Worm    87 TYKKTSHLRAHLRKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFCIRQFSRSDH 151

  Fly   739 LALHM 743
            |..|:
 Worm   152 LQQHL 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 32/82 (39%)
C2H2 Zn finger 671..688 CDD:275368 10/16 (63%)
zf-H2C2_2 680..707 CDD:290200 14/26 (54%)
C2H2 Zn finger 696..718 CDD:275368 12/21 (57%)
zf-H2C2_2 710..735 CDD:290200 11/24 (46%)
C2H2 Zn finger 726..746 CDD:275368 10/18 (56%)
sptf-2NP_495833.1 COG5048 <75..156 CDD:227381 41/80 (51%)
C2H2 Zn finger 82..101 CDD:275368 11/18 (61%)
C2H2 Zn finger 109..131 CDD:275368 12/21 (57%)
C2H2 Zn finger 139..156 CDD:275368 9/16 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1623
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.890

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