DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and klf-1

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_497632.1 Gene:klf-1 / 175404 WormBaseID:WBGene00018990 Length:497 Species:Caenorhabditis elegans


Alignment Length:516 Identity:142/516 - (27%)
Similarity:193/516 - (37%) Gaps:158/516 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 PSLALPGLPP-AVDVVELQLQQQHQQQQHLQHNNSSSSSPK--------LATPGDN--------- 402
            |.:.:|..|. ::|.:....:..|......|...||.||..        .||...|         
 Worm    14 PLIHIPNKPSLSIDPLARADRSVHLSPSFFQPGLSSISSENDDAEQRIHEATRSFNQFGHQFYES 78

  Fly   403 ----SGNTSSYQQQYASQL------VSGSGGGYLNGSSSNSY--------GYSWHSSQSFHTKYQ 449
                |.:||:|::..|:.|      ..|:..|....|||:|.        .::.:.:..|.:...
 Worm    79 IRELSESTSAYERLKANALRRKLENTFGNDSGAATSSSSSSVFERQSDFSAFAPYKNSHFDSTQS 143

  Fly   450 IHPPSAA------------------ASATASATATPTAQLGAQQQQQQQQQQ------------- 483
            :..|:.:                  :.::.|...|||..|||..|..|.::.             
 Worm   144 LFQPTTSFNDRLEQIKSDFIAEHQKSMSSFSGFNTPTTALGAAFQGMQVKKSAFAPVLLRENLDT 208

  Fly   484 ------------------QLQQLCPPAAPSTP-----STSSSSISSSSASSASRHMFVPPLTPPS 525
                              |.:.|....|.:.|     |||:..|:||| |..|.|.....:....
 Worm   209 RRPGGHLISDILNRDPLPQSRNLNLNMARNVPIRLIHSTSNFDIASSS-SGDSGHQDHESIVVED 272

  Fly   526 SDPGSPGSSMVAAAAA------------AAAQRRTTPPPPYQQGHVMGLI--NPPPTL------Q 570
            :|..||.|..|..:|.            ..:...|:..|......|...:  |..|..      :
 Worm   273 ADMDSPTSPCVKRSAMNFDLRDEPLTVNVESVSSTSDLPSSVSSSVNSFVYQNFDPLEFKRKIDE 337

  Fly   571 LLGGAATG---SNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQP------------PPTPRSS 620
            |...|...   ..|.....:...|...||::|.::.|.......|.            .|:|.||
 Worm   338 LTASACLAVMPDANGQVDPMAIKTQLDAIKKQMEEHQTHMAEASQRLHVDSSLEDSNCEPSPSSS 402

  Fly   621 GGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQ 685
                             :.||..||               :|:|||....|.||||||||||||.
 Worm   403 -----------------YDASEPSV---------------KRLHHCTHPNCGKVYTKSSHLKAHF 435

  Fly   686 RIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRH 746
            |.|||||||.|.|..|:||||||||||||||||||.:||||..|.|:|:|||||:||||||
 Worm   436 RTHTGEKPYECSWDGCDWRFARSDELTRHYRKHTGDRPFKCSQCSRAFSRSDHLSLHMKRH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 49/82 (60%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
zf-H2C2_2 680..707 CDD:290200 19/26 (73%)
C2H2 Zn finger 696..718 CDD:275368 17/21 (81%)
zf-H2C2_2 710..735 CDD:290200 18/24 (75%)
C2H2 Zn finger 726..746 CDD:275368 13/19 (68%)
klf-1NP_497632.1 COG5048 398..>481 CDD:227381 58/114 (51%)
C2H2 Zn finger 419..438 CDD:275368 14/18 (78%)
zf-H2C2_2 430..457 CDD:290200 19/26 (73%)
C2H2 Zn finger 446..468 CDD:275368 17/21 (81%)
zf-H2C2_2 460..485 CDD:290200 18/24 (75%)
C2H2 Zn finger 476..496 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165290
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BRQ6
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14470
orthoMCL 1 0.900 - - OOG6_107236
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.740

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