DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and klf-1

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_497632.1 Gene:klf-1 / 175404 WormBaseID:WBGene00018990 Length:497 Species:Caenorhabditis elegans


Alignment Length:516 Identity:142/516 - (27%)
Similarity:193/516 - (37%) Gaps:158/516 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 PSLALPGLPP-AVDVVELQLQQQHQQQQHLQHNNSSSSSPK--------LATPGDN--------- 402
            |.:.:|..|. ::|.:....:..|......|...||.||..        .||...|         
 Worm    14 PLIHIPNKPSLSIDPLARADRSVHLSPSFFQPGLSSISSENDDAEQRIHEATRSFNQFGHQFYES 78

  Fly   403 ----SGNTSSYQQQYASQL------VSGSGGGYLNGSSSNSY--------GYSWHSSQSFHTKYQ 449
                |.:||:|::..|:.|      ..|:..|....|||:|.        .::.:.:..|.:...
 Worm    79 IRELSESTSAYERLKANALRRKLENTFGNDSGAATSSSSSSVFERQSDFSAFAPYKNSHFDSTQS 143

  Fly   450 IHPPSAA------------------ASATASATATPTAQLGAQQQQQQQQQQ------------- 483
            :..|:.:                  :.::.|...|||..|||..|..|.::.             
 Worm   144 LFQPTTSFNDRLEQIKSDFIAEHQKSMSSFSGFNTPTTALGAAFQGMQVKKSAFAPVLLRENLDT 208

  Fly   484 ------------------QLQQLCPPAAPSTP-----STSSSSISSSSASSASRHMFVPPLTPPS 525
                              |.:.|....|.:.|     |||:..|:||| |..|.|.....:....
 Worm   209 RRPGGHLISDILNRDPLPQSRNLNLNMARNVPIRLIHSTSNFDIASSS-SGDSGHQDHESIVVED 272

  Fly   526 SDPGSPGSSMVAAAAA------------AAAQRRTTPPPPYQQGHVMGLI--NPPPTL------Q 570
            :|..||.|..|..:|.            ..:...|:..|......|...:  |..|..      :
 Worm   273 ADMDSPTSPCVKRSAMNFDLRDEPLTVNVESVSSTSDLPSSVSSSVNSFVYQNFDPLEFKRKIDE 337

  Fly   571 LLGGAATG---SNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQP------------PPTPRSS 620
            |...|...   ..|.....:...|...||::|.::.|.......|.            .|:|.||
 Worm   338 LTASACLAVMPDANGQVDPMAIKTQLDAIKKQMEEHQTHMAEASQRLHVDSSLEDSNCEPSPSSS 402

  Fly   621 GGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQ 685
                             :.||..||               :|:|||....|.||||||||||||.
 Worm   403 -----------------YDASEPSV---------------KRLHHCTHPNCGKVYTKSSHLKAHF 435

  Fly   686 RIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRH 746
            |.|||||||.|.|..|:||||||||||||||||||.:||||..|.|:|:|||||:||||||
 Worm   436 RTHTGEKPYECSWDGCDWRFARSDELTRHYRKHTGDRPFKCSQCSRAFSRSDHLSLHMKRH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 49/82 (60%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
C2H2 Zn finger 696..718 CDD:275368 17/21 (81%)
zf-H2C2_2 710..735 CDD:463886 18/24 (75%)
C2H2 Zn finger 726..746 CDD:275368 13/19 (68%)
klf-1NP_497632.1 C2H2 Zn finger 419..438 CDD:275368 14/18 (78%)
zf-H2C2_2 430..457 CDD:463886 19/26 (73%)
C2H2 Zn finger 446..468 CDD:275368 17/21 (81%)
zf-H2C2_2 460..485 CDD:463886 18/24 (75%)
C2H2 Zn finger 476..496 CDD:275368 13/19 (68%)

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