DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and klf3

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_571934.3 Gene:klf3 / 117603 ZFINID:ZDB-GENE-011116-1 Length:328 Species:Danio rerio


Alignment Length:345 Identity:128/345 - (37%)
Similarity:167/345 - (48%) Gaps:78/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 QSFHTKYQIHPPSAAASA-TASATATPTAQLG-AQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSI 504
            :|..|...:.||:..:.| ...:...|:.||. :.:|.|...|.|::    |...|..:.||.|.
Zfish    21 KSHETFGMVLPPAVVSGAHLYPSHYHPSYQLPYSHRQSQDVHQAQIE----PVDLSIGNKSSGSS 81

  Fly   505 SSSSASSASRHMFVPPLTPPSS-DPGSPGSSMVAAAAAAAAQRR------TTPPPPYQQ------ 556
            .|||.:|:|     |..:|||. :..||        |:..:|.|      |.|.|...|      
Zfish    82 PSSSLASSS-----PRASPPSPYEAHSP--------ASRCSQNRQLSPSLTLPIPAVTQVLTPFV 133

  Fly   557 ---GHVMGLINP-----PPTLQLLGGAATGSNNSCTTTLTTLTPA-----SAIQQQQQQPQQQQV 608
               |.:..:..|     ||:|.|       |.:...:.:|...||     |.|:.:......:.:
Zfish   134 SSPGMIPVIPMPLSVLYPPSLHL-------SPSIIISPVTPEDPANHKHFSVIKSENTSDHHELL 191

  Fly   609 PQQQPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTV--RYNRRNNPE---------LEKRR 662
            ...:..|.|..:    :..||..:           ||.|.  .||.|.|.:         |:|||
Zfish   192 KPIKSEPHPEHT----QDNHSQEK-----------SVITALPNYNDRGNTQSPKVESPDLLKKRR 241

  Fly   663 IHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCI 727
            ||.|||.||:||||||||||||:|.|||||||.|.|..|.|:||||||||||||||||.|||.|.
Zfish   242 IHRCDFNGCNKVYTKSSHLKAHRRTHTGEKPYKCMWEGCTWKFARSDELTRHYRKHTGVKPFHCP 306

  Fly   728 VCERSFARSDHLALHMKRHL 747
            .|:|:|:||||||||.||||
Zfish   307 DCDRTFSRSDHLALHKKRHL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 59/93 (63%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
zf-H2C2_2 680..707 CDD:290200 18/26 (69%)
C2H2 Zn finger 696..718 CDD:275368 16/21 (76%)
zf-H2C2_2 710..735 CDD:290200 18/24 (75%)
C2H2 Zn finger 726..746 CDD:275368 13/19 (68%)
klf3NP_571934.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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