DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and klf2a

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_571931.2 Gene:klf2a / 117508 ZFINID:ZDB-GENE-011109-1 Length:380 Species:Danio rerio


Alignment Length:376 Identity:113/376 - (30%)
Similarity:142/376 - (37%) Gaps:122/376 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 GSGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQ 484
            |..|.|....|.|.|..:.:|....:       ||.....|.|..|             :..|..
Zfish    79 GMAGDYRMQESRNMYNPTTYSVPEIN-------PSPPPPYTTSLMA-------------ELLQSD 123

  Fly   485 LQQLCPPA-------APSTPSTSSSSISSSSASSASRHMFVPPLTPPSSDPGSPGSSMV------ 536
            :...|.|:       .|:.|:...|....               ..|..|...|...||      
Zfish   124 IDTYCQPSLQGRFLVRPAFPTQDISECIK---------------VEPCMDSYGPVRGMVPKVKQE 173

  Fly   537 --AAAAAAAAQRRTTPPPPYQQGHVMGLINPPPT-LQLLGGAATGSNNSCTTTLTTLTPASAIQQ 598
              .|...:..|.|....|   ||  .|.:.||.: .:|:       |..|.:. :.:..|....|
Zfish   174 GNGACMRSYEQPRLANSP---QG--AGSMTPPQSPAELI-------NTDCQSH-SQMCHALTFSQ 225

  Fly   599 QQQ--------QPQQQQVPQQQ-----------------------PPPTP-RSSGGGRRGRHSHH 631
            ..|        .|.|.|:|.|.                       ||.:| ......:|||.:..
Zfish   226 SYQGNTGFPHAAPPQMQLPYQSTHHFSMCDDGLAMPNANQRVLLTPPSSPLELDAKPKRGRRTWP 290

  Fly   632 QPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTC 696
            :..||.|.                          |.|.||.|.||||||||||.|.|||||||.|
Zfish   291 RKRTATHT--------------------------CTFSGCGKTYTKSSHLKAHHRTHTGEKPYHC 329

  Fly   697 QWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHL 747
            .|..|.|:||||||||||:|||||.:||:|.:|||:|:||||||||||||:
Zfish   330 SWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCERAFSRSDHLALHMKRHM 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 42/82 (51%)
C2H2 Zn finger 671..688 CDD:275368 13/16 (81%)
zf-H2C2_2 680..707 CDD:290200 18/26 (69%)
C2H2 Zn finger 696..718 CDD:275368 15/21 (71%)
zf-H2C2_2 710..735 CDD:290200 17/24 (71%)
C2H2 Zn finger 726..746 CDD:275368 15/19 (79%)
klf2aNP_571931.2 COG5048 <273..>364 CDD:227381 53/116 (46%)
C2H2 Zn finger 302..321 CDD:275368 14/18 (78%)
C2H2 Zn finger 329..351 CDD:275368 15/21 (71%)
zf-H2C2_2 343..368 CDD:290200 17/24 (71%)
C2H2 Zn finger 359..379 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.