DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dar1 and Klf3

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001099212.1 Gene:Klf3 / 114845 RGDID:1593290 Length:344 Species:Rattus norvegicus


Alignment Length:306 Identity:108/306 - (35%)
Similarity:143/306 - (46%) Gaps:83/306 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 PPAAPSTPSTSSSSISSSSASSASRHMFVPPLTPP--SSDPGSPG-------SSMVAAAAAAAAQ 545
            ||:|..:|    ||:...|...||..:.:|..:||  ...|.|||       .||....|||..:
  Rat    72 PPSAAGSP----SSLKFPSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVPLSMPPVMAAALTR 132

  Fly   546 RRTTPPPPYQQGHVMGLINP---------------PPTLQLLGGAATGSNNSCTTTLTTLTPASA 595
            .....|      .::.:|.|               .|.:..|......||:.        .|...
  Rat   133 HGIRSP------GILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMDNSNSG--------MPVPV 183

  Fly   596 IQQQQQQPQQQQV--------------PQQQPPPTPRSSGGGRRGRHSHH-----QPGTAAHIAS 641
            |:..::...|:::              |::..||...|....:.....:|     |||       
  Rat   184 IESYEKPILQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQPG------- 241

  Fly   642 LMSVRTVRYNRR----NNPELE-KRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPEC 701
                      :|    .:|:.: |||||.||:.||:||||||||||||:|.|||||||.|.|..|
  Rat   242 ----------KRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGC 296

  Fly   702 EWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHL 747
            .|:||||||||||:|||||.|||:|..|:|||:||||||||.|||:
  Rat   297 TWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHM 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 51/87 (59%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
C2H2 Zn finger 696..718 CDD:275368 15/21 (71%)
zf-H2C2_2 710..735 CDD:463886 18/24 (75%)
C2H2 Zn finger 726..746 CDD:275368 14/19 (74%)
Klf3NP_001099212.1 KLF3_N 49..259 CDD:410554 44/221 (20%)
zf-C2H2 259..283 CDD:395048 18/23 (78%)
C2H2 Zn finger 261..283 CDD:275368 17/21 (81%)
C2H2 Zn finger 291..313 CDD:275368 15/21 (71%)
zf-H2C2_2 305..330 CDD:463886 18/24 (75%)
C2H2 Zn finger 321..341 CDD:275368 14/19 (74%)

Return to query results.
Submit another query.